Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi244g00031 ATGGCATTGATGCCTTGTACCATGTTCTCTTCCATTGCTCACTTGTCAAACACTTATGCTAAGCTTTCTTCTCCCTCTAGAGACAATTCTGAGTCTTGGCAAATTCTTAAGAACAAAGATGACAAGGTTCTAGAGTCTACCCATAGGACAGTTGTGCGTGTCTATGAAAGCGTGAAATGGAAGATGGCAAAGGCAAGGGACAGAACCGAGGATTTCAAAGATGCCGTGCGCCAGAGTGCTCGCTCTTTGGGTTATGATGAGGCTAAATTGGCGTCCATTTTGGCATCTTTCATTATTCATAAACCTCCGCCAAGATCTCCATTTTCCAAAGCTGCATTGAAGACGCTTGAGAGTATTGGTGAATTGGAACAGTTTTTGTTAAAGCATAGAAAGGACTATACAGATCTACACCGCACAACTGAACAGGAGAGAGATAGCATTGAGCATGAAGTTAGTGCTTTTATTAAAACTTGCCAGGAACAAATTGACGTTCTTAAGAATAGTATAAATCATGAAGAGGAAAATTCGAAAGGTTGGCTTGGCATTGCAACTGCAAAGTCTAATGCTGACACCATTGCCCATAAACATGGGGTGGTTTTAATTTTAAGTGAGAGACTCCATTCGGTTACAACACAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAATAGAGCAATACCACGAAGAAAACTTAATCGTGTGACCAGGAAAGATTCTACTGAAACCTCTAAATCAGCAGATGATGTGGAGCTCAGAGAACCTGATGAGATACGAAGTGAGCCTCTAAGACTCCAACAGAAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTAATCTTCTAGATACAGTCCAAGAAACTGAAACTAAGATGGTGGAAATGTCTGCATTAAATCACCTCATGTCTACACATGTTTTGCAACAAGCTCAGCAAATTGAGATTCTGTATGAGCAGGCCGTTGAAGCTACTAAGAATGTTGAGCTTGGTAACAAAGAACTCTCACAAGCCATTCAGCGTAATAGCAGCAGCAGGACATTTCTTTTGCTGTTTCTGATTGTGCTTATTTTTTCCATCCTCTTTCTTGATTGGTATAGTTAA 1116 0.4104 MALMPCTMFSSIAHLSNTYAKLSSPSRDNSESWQILKNKDDKVLESTHRTVVRVYESVKWKMAKARDRTEDFKDAVRQSARSLGYDEAKLASILASFIIHKPPPRSPFSKAALKTLESIGELEQFLLKHRKDYTDLHRTTEQERDSIEHEVSAFIKTCQEQIDVLKNSINHEEENSKGWLGIATAKSNADTIAHKHGVVLILSERLHSVTTQFDQLRAVRFQDAINRAIPRRKLNRVTRKDSTETSKSADDVELREPDEIRSEPLRLQQKLLDDETRALQVELTNLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIEILYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLIVLIFSILFLDWYS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi244g00031 371 Coils Coil 155 175 - -
Sebi244g00031 371 Pfam SNARE-complex protein Syntaxin-18 N-terminus 67 147 IPR019529 -
Sebi244g00031 371 SUPERFAMILY t-snare proteins 117 335 IPR010989 GO:0016020|GO:0016192
Sebi244g00031 371 Gene3D - 274 368 - -
Sebi244g00031 371 MobiDBLite consensus disorder prediction 236 259 - -
Sebi244g00031 371 PANTHER SYNTAXIN-18 62 371 - -
Sebi244g00031 371 FunFam Syntaxin-81 like 274 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi244g00031 Sebi-Chr244 538473 543471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi244g00031 126 371 SNARE and Associated Proteins AT1G51740 74.494 1.15e-115 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi244g00031 K08492 - gmx:100778011 528.865