LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi243g00093	ATGGTGAACTTCAGAGAGAACACAGCACCCGGTGAAATGATGAGCCTCTGTGTGCTACTGTTTTTTCTTCCGCTGTTGTTTCCTCTAGAGGTTAACTCATACGTCCCTGTTGAAAATTATGCTGTTAACTGTGGTGACTCAAATGATGTTACCATTTATAATCGAATCTGGGTTGGAGACGTTAGCACCAAGCAGTACTTTTCTATCATTGAACCACAAACAGGGCAACCATCTGTCAAAGCCGAGGCTCTTAACCGTTTTCCAGGTAACCCAGTATTTCCGGTTGGCTCCGCACGCCTCTCTCTCTCCAAATTCACATACTCCTTTGTTAATGTCACTAGCGGCCCAAAGTTCCTTCGCCTTCACTTTTATCCAATGTCATATCTTAACTTTGAACCCTACAACGCCCTCTTCTCTGTCATAGCAGGCAATTTCACCCTTCTCAAAGACTTCAACGCCTCACTTTGGGTTCACAGTGATGAAAAGACAATCAGCAAAGAATACTGTCTCAACGTGGAAACAGGTGAGAGGCTAAACATAACCTTCCTTCCCAGCAATAACCACTCTGATGCTTATGCTTTTATCAACGGGATCGAGGTTGTGTCTATGCCTCCCTTCCTCTATTACACTAATCTCAGTGACTTAGATTATAAATTTAAGCAAGTGGGTCATGGTGATACCTCATTCCAAATTCAAAAGGACAAAGCTCTGGACACACTTTACAGAGTTAATGTTGGTGACAATCAGGTTCCACCGAGCAACGATACTGGCATGTTCCGGAATTGGGACAATGATTATCCTGGCTACTTGGAGAAGCAATACCCACTCAGTGTGTCAACTGGCTATGCACTTCAACTCAACTATAGAAATAATGCTGTTCCCAATTACACAGCACCAGCCGATGTATACTTAACTGCCAGAAGTTACGGGATGGATGCGACCGAGAATTATAATGTAACTTGGACCTTTGAAGTGGATTCACAGTTCACTTATATGGTCAGGTTACATTTCTGTGAGTTTGAGTACTGGCGGATAAAGCACTACGGGGATAGAGCTTTCCAGATTTTTATAGCAGAGACTTTGGCGGAAGTATACGCCGATTTGATCGGCTGGGGTGACGGATTCAACCTAGTTCCTATTCATAGGGATTATGCTGTTGTTATGTCCACGCTAGGAGACTCTAAGAAAGTCAATCTTTCAATCAAGCTACAACAAATGCCAGATATCATAACCAAATACCATGATGTCATATTAAATGGAATCGAGATTTTCAAAATTAGTGACCAAAATAACAATCTTGCCGGTCCGAATCCCGAACCTATTCTATCTCTATCTCATTCTGCACAGAATCCAAAGACCACCACAGTTATCGTTGTCGTGGTTGCAGTTTCAGCCCTCATGGTAGCATCTGTTATTGGCATCATGGTTTTTCAGCGACGAAGAAGGACAAGAGGCCATAACAAGGAAGAAAACTGGTGGAAGAAAAAGACTGAAGAAGACTCATCTTTTCCATCATGTTCGGGTCGCTACTTTACAATCGGAGAGATCAGGGCTGCCACAAACAACTTCGCCGATGTTTCCATCATCGGAGTTGGAGGGTTCGGAAACGTGTACAAGGGTTACATCGATGGAGCCACACCCGTTGCGATCAAACGTCTCAAACCGGATTCTCACCAAGGTGCCAGCGAGTTCATGAACGAGATCGAGTTGCTCTCCCAGCTTCGCCACCTTCATCTCGTTTCCCTCATTGGTTACTGCAACGACGGCGTAGAGATGATCCTCGTCTATGACTTCATGCAACGTGGCACTCTCCGCGAGTATCTCTACAACTCTGATAACCAACCCCTTTCGTGGAAGAAGAGGCTTGAGATCTTATTGGGTGCAGCGAGAGGGTTGCATTATCTTCATACAGGTGCGCAGCACAATATCATTCACCGTGACGTGAAGAGCACCAACATTCTGTTGGATGAAAATTGGGTGGCTAAGCTTTCTGACTTGGGATTATCCAAAGTGGGACCCACTGGAATATCCAAGACCCACGTTACCACGCTTGTGAAGGGGAGCCTTGGGTATTTGGACCCGGAATACTTCAGGAGTCAAAGGTTGACTCTAAAGTCTGACGTGTACTCGTTCGGTGTGGTGCTTCTTGAGGTATTGTGTGGGCGGCCACCTATAGTTCGTACGTTGGACATGCAGAGGGAAAGCTTGGTGGATTGGGTTCGGAGATGTTATGATAAAGGAGAGATTGATCAAACTGTGGATCCATTTATAAAGGATTCTGTTACGGCTGAGTGCTTGAAATGTTACAGCCAGATGTTCATGAGTTGTTTGCATGATGATGGAAATCAACGGCTCTCAATGAGTGAGGTCGTTGGCGCTTTGGAGTTTGCATTGCAATTGGTGGAGAATGAGGAAGATAACAAGATTCATGTGACCCAAGAAGAGGGAAACACCGAGGAAAAACCGTGGTTGCCGCAGTTTACAAGTGATCATCATGAAGGGAGTACTCATACAGGAACAGCGTTGTCGACAGAATCCGGTAGCTATGGTGGCAAGAGTCTCAGCCAATAA	2571	0.45	MVNFRENTAPGEMMSLCVLLFFLPLLFPLEVNSYVPVENYAVNCGDSNDVTIYNRIWVGDVSTKQYFSIIEPQTGQPSVKAEALNRFPGNPVFPVGSARLSLSKFTYSFVNVTSGPKFLRLHFYPMSYLNFEPYNALFSVIAGNFTLLKDFNASLWVHSDEKTISKEYCLNVETGERLNITFLPSNNHSDAYAFINGIEVVSMPPFLYYTNLSDLDYKFKQVGHGDTSFQIQKDKALDTLYRVNVGDNQVPPSNDTGMFRNWDNDYPGYLEKQYPLSVSTGYALQLNYRNNAVPNYTAPADVYLTARSYGMDATENYNVTWTFEVDSQFTYMVRLHFCEFEYWRIKHYGDRAFQIFIAETLAEVYADLIGWGDGFNLVPIHRDYAVVMSTLGDSKKVNLSIKLQQMPDIITKYHDVILNGIEIFKISDQNNNLAGPNPEPILSLSHSAQNPKTTTVIVVVVAVSALMVASVIGIMVFQRRRRTRGHNKEENWWKKKTEEDSSFPSCSGRYFTIGEIRAATNNFADVSIIGVGGFGNVYKGYIDGATPVAIKRLKPDSHQGASEFMNEIELLSQLRHLHLVSLIGYCNDGVEMILVYDFMQRGTLREYLYNSDNQPLSWKKRLEILLGAARGLHYLHTGAQHNIIHRDVKSTNILLDENWVAKLSDLGLSKVGPTGISKTHVTTLVKGSLGYLDPEYFRSQRLTLKSDVYSFGVVLLEVLCGRPPIVRTLDMQRESLVDWVRRCYDKGEIDQTVDPFIKDSVTAECLKCYSQMFMSCLHDDGNQRLSMSEVVGALEFALQLVENEEDNKIHVTQEEGNTEEKPWLPQFTSDHHEGSTHTGTALSTESGSYGGKSLSQ	856

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi243g00093	856	FunFam	FERONIA receptor-like kinase	235	427	-	-
	Sebi243g00093	856	ProSitePatterns	Protein kinases ATP-binding region signature.	529	551	IPR017441	GO:0005524
	Sebi243g00093	856	Gene3D	Transferase(Phosphotransferase) domain 1	599	819	-	-
	Sebi243g00093	856	FunFam	Receptor-like protein kinase FERONIA	599	816	-	-
	Sebi243g00093	856	MobiDBLite	consensus disorder prediction	812	856	-	-
	Sebi243g00093	856	Pfam	Protein tyrosine and serine/threonine kinase	528	792	IPR001245	GO:0004672\|GO:0006468
	Sebi243g00093	856	FunFam	FERONIA receptor-like kinase	39	204	-	-
	Sebi243g00093	856	Gene3D	-	39	203	-	-
	Sebi243g00093	856	Gene3D	-	236	427	-	-
	Sebi243g00093	856	CDD	STKc_IRAK	529	795	-	-
	Sebi243g00093	856	ProSiteProfiles	Protein kinase domain profile.	523	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sebi243g00093	856	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	643	655	IPR008271	GO:0004672\|GO:0006468
	Sebi243g00093	856	SUPERFAMILY	Protein kinase-like (PK-like)	507	792	IPR011009	-
	Sebi243g00093	856	MobiDBLite	consensus disorder prediction	829	856	-	-
	Sebi243g00093	856	PANTHER	OS03G0124300 PROTEIN-RELATED	17	496	IPR046957	GO:0004672
	Sebi243g00093	856	SMART	serkin_6	523	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sebi243g00093	856	Gene3D	Phosphorylase Kinase; domain 1	483	598	-	-
	Sebi243g00093	856	FunFam	receptor-like protein kinase FERONIA	486	598	-	-
	Sebi243g00093	856	Pfam	Malectin-like domain	43	426	IPR024788	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi243g00093	Sebi-Chr243	1355798	1358454	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi243g00093	34	855	Receptor kinase-like Gene Family	AT3G51550	45.790	0.0	648

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Sebi243g00093		Malectin_like	2.8e-32	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi243g00093	-		-	mtr:25497555	943.725