Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi243g00092 ATGTTGCACGAAACCGTTCCCAATTTGAAATCGGATGCGCGTGGTGGCTTCCAACGAAAGAAACGCAACCGCAATGGCTGCGCACGTCGCACGAAGATTGTTGAGGATGAAACAATTGCTTTACGGTGTTGTAACGAAGCTCGCGCGGTGGTGAGAAGTGCAGCCACAGCCGATCAGCTACAACGCCCGATCCAGCGGCAGGACATGGTAGACGTCGTGCGCACCAACCAGTTGGAGAAGCTGAGGATGAACGAGGCGCTAATGGCTCTGCCTTTGAAGCTTGATTCGGTGCCTGGGATTGATGCAATGGAGGCACTTCTTGTCAAGCTTGTTGGAGTTCGAAAGTGGGTATCTGCAGCTTTGCCAGGGACTTTGATTGCTCGGAAGCCGGTGGTTGTCGAGGTGTTGTTGAGAGCCATGTTTGATTTCCAGGACAGCGTGAGGAATCAAAGAGAGAATTTGATTCTGCTTCTTGCTAACTCTCATATAAGGCTAAATCCTAAACCTGAGCCTTTCAACAAGCTGTGGCTCCCTCCAGCAACTCCTCATCGCTCGATGGTCCCAATTGGACCTTACAACTCAGCTCGTCTCTCACAACTCCCAATTCACATACTCATTCACCGGAGTATTGCATCCACGTGGAAGATGGTCAGAAGCCTGCTGAACCTAACGTTCATTCCTAATACCCCGGATTCGACTCCAACTCGTTTCCATGCCAGCAGTGACGTCACCCTCGCTGCCGTCACCGGTGGATTTACCGGTCTCGTCTTGTTCTGCCTTGTGGTCGCTTTCTTCCTCATCAACCGCCGGAAGAAAGGTGCGCAACCTCTGTCGCCAAAATATGGCTCCTCCTCCTCTCTACCTATCAACCTTTGCCGCCACTTTTCGATCGAAGAAATCAGAGCCGCAACCAACAAATTCGATGAGCAACTAGAGATTGGCGTGGGAGGGTTCGGCAACGTGTACAAAGGCTACATCAATGATGGTCCATCATTGCTACCAGTTGCAATCAAAAGGCTCAAACCGGGTTCTCAGCAAGGTGCGCACGAGTTCATGAATGAGATCGAAATGCTCTCTCAACTTCGCCATATCCATCTCGTGTCCCTCATCGGTTACTGCTACGAAAGTAACGAGATGATCCTGGTTTATGATTTCATGGCTCGTGGAACCCTAAGTGATCATCTCTACGACACTGATGATGACTCTTCTCTGCCGTGGAAACAGAGGCTCCAGATTTGCATAGGTGCTGCACGGGGACTGCATTATCTCCATACAGGTGCGAAGCACATGATCATTCACCGTGATGTCAAGAGCACCAATATCTTGTTGGATGAGAAATGGGTAGCCAAGGTTTCGGACTTCGGGTTATCCAGGATTGGACCCACGGATCCAGAGTATTACAAACGACAGCGTTTGACTGAGAAATCTGACGTGTACTCGTTTGGAGTGGTGCTGTTGGAGGTGTTGTGTGCGAGGCAGCCTTTGCTTCGTGAGGCAGAGAAGAAACAGGTGTCACTTGTTGATTGGGCGCGACGTTGCTATGAAATGGGCACTTTGGCTGAGATTGTGGATCCAGCACTGAATGCGATGACATGTTTACCGGTACTCAAAGCAGTAGACATGCTTCGGATTATAGTAAGAGCACTGGAATCACCACAACAAGCAATGGAGATCACAGCTGTCGGAGTAAGGAAACAGATAGGTTGA 1707 0.4997 MLHETVPNLKSDARGGFQRKKRNRNGCARRTKIVEDETIALRCCNEARAVVRSAATADQLQRPIQRQDMVDVVRTNQLEKLRMNEALMALPLKLDSVPGIDAMEALLVKLVGVRKWVSAALPGTLIARKPVVVEVLLRAMFDFQDSVRNQRENLILLLANSHIRLNPKPEPFNKLWLPPATPHRSMVPIGPYNSARLSQLPIHILIHRSIASTWKMVRSLLNLTFIPNTPDSTPTRFHASSDVTLAAVTGGFTGLVLFCLVVAFFLINRRKKGAQPLSPKYGSSSSLPINLCRHFSIEEIRAATNKFDEQLEIGVGGFGNVYKGYINDGPSLLPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHIHLVSLIGYCYESNEMILVYDFMARGTLSDHLYDTDDDSSLPWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTDPEYYKRQRLTEKSDVYSFGVVLLEVLCARQPLLREAEKKQVSLVDWARRCYEMGTLAEIVDPALNAMTCLPVLKAVDMLRIIVRALESPQQAMEITAVGVRKQIG 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi243g00092 568 SUPERFAMILY Protein kinase-like (PK-like) 284 538 IPR011009 -
Sebi243g00092 568 PANTHER OS07G0166700 PROTEIN 292 532 IPR045272 GO:0004714|GO:0006468
Sebi243g00092 568 Gene3D Transferase(Phosphotransferase) domain 1 386 561 - -
Sebi243g00092 568 Pfam Protein tyrosine and serine/threonine kinase 312 504 IPR001245 GO:0004672|GO:0006468
Sebi243g00092 568 FunFam Os07g0541700 protein 386 474 - -
Sebi243g00092 568 SMART serkin_6 307 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00092 568 ProSitePatterns Protein kinases ATP-binding region signature. 313 338 IPR017441 GO:0005524
Sebi243g00092 568 Gene3D Phosphorylase Kinase; domain 1 277 385 - -
Sebi243g00092 568 ProSiteProfiles Protein kinase domain profile. 307 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00092 568 FunFam receptor-like protein kinase FERONIA 271 385 - -
Sebi243g00092 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi243g00092 Sebi-Chr243 1340949 1346077 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi243g00092 255 555 Receptor kinase-like Gene Family AT3G51550 54.913 1.67e-111 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi243g00092 PK_Tyr_Ser-Thr 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi243g00092 - - gmx:100305394 428.713