Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi243g00085 ATGCTGCACTTGAGCATGAACCATTTCACCCTTGTTTCCAAATCCAAATCATCAACAATCAGACTCTTTTATCTCATATTCTCAGTCCTTCAACACACGTTCATCATCCCCATTAACTCTAACACCCTTCCACAAGATCTCGCAATCAACTGTGGCTCTTCCTCTGAATCAAATTCCACATGGACTGGAGACATCACTTTTTCAAAACGTTTTACTCTCTTCGAACCACAAAGAAACCAGTCTTCAATCGCTGCAATTTCACCTCAGCTTTCTGATTCACAACTTAACAGAGTCCCCTATGGCACCGCACGCCTCTCTCACTATGAATTCACCTACTCGTTACAAGTCTCTGCAGGCCCAAAGTTCCTTAGGCTCCATTTTCACCCAGCTTCATACCCCAACTTCCACCGTTCCATGTCCTTATTCTCTGTAAAAGCAGGGCCTTATACCCTTCTCAAGGATTTCAACGCTTCACGTGTTTCTGATAAGGGTGGTGATCCTCAAAAGAAGATTCTTTTCATGGAGTACTGCATAAAAATTGAACAGGGTGATCAGAGGCTAAACCTGACCTTCACACCAAATCACACCACTCATGCAGATTCCTATGCCTTTATCAATGGAATCGAAGTCCTGTCTTTATTCAAATCCAATCTTCATTGCAGTAAGCCAAACTATTCTTCGTTCAAATTTGTTAGCATAATCCATGAAACCAAAACCAATCTTAGTTTATCAGGATCACCAGCAGGATCAGAATCAGATTGCTCAAAGCGTGAGAAAACAAAATTTGTCGCTGTTTTCTGCGGTGCAGTTGTTTCTGTTTTTATTTTGGGGTCTGTTATTTACTTATTGTGTATTTGGTTCCGGAAAATGGCTAGAACAGAGGTGGAGGTGGGTTCTGAAGAGATAAGCAATAAAAGTATATCAGTATCGTCTTCAAATTTGTGCCGTTACTTCTCAATCATTGAGATAAGAGCAGCAACAATAAACTTTGATGACATTTTCGTTGTTGGCGTTGGAGGTTTTGGGAAAGTGTATAAAGGTTACATTGATGATGGTACCATACCAGTGGCAATCAAACGTTTCATTCCAAATTGTGGACAAGGAGTTCAAGAGTTCAAAACAGAGGTTGAGATGCTTTCTCAGCTTAGCCATCCTCATTTGGTCTCTCTGATTGGTTTCTGTAACGATGAAGATGACATGATAATTGTCTATGATTTCATGGCCAATGGGACCCTCCGTGACCATCTACATGGTTCATCAGCAAAAGCCCCTCTTTCGTGGAAGCAACGGCTTGAGATTTGCATTGGGGCAGGGCTTGGATTACAGTATCTCCATAATGGTGCCAAGTATAGTATTATTCACCGTGATGTGAAAAGTTCCAACATTTTGTTGGATGAGAAATGGGTGGCTAAGATTTCGGATTTTGGGTTGTGTAAATTTGGACCAAATGGGATTTCTAAGTTCCATGTAACCACACAAGTGAAAGGTAGCCTTGGATATTTAGACCCTGAATACTCCAAGACAAAGTGGTTGACCCACAAGTCTGATGTGTACTCTTTTGGTGTGGTGTTGCTTGAAGTCTTGTGTGGGAGGCCACCTTTGTTGCGTAAAGTGAAAGGGCAAGAGAGAATCTTGGTGGAGTGGGCCCGAACATGCCATAGTGAGGGACCTCAAGCCATAGACCAAATGGTTGATCCATTTCTGAGAGGAAAAATAGTGCCAAAGTGTTTAGATAAGTTCATTGAGGTGGCAATGAATTGTGTTGTTTATGATGGAAATGAACGACAATCAATGAGTGATGTGGTAGAGGGGCTTGAGCTTGCTTTGCAGCTACAACAGAGCATAGAAGAAGAAGATCCAAGGTTCAGCAGAATGAAAGATTGA 1884 0.4172 MLHLSMNHFTLVSKSKSSTIRLFYLIFSVLQHTFIIPINSNTLPQDLAINCGSSSESNSTWTGDITFSKRFTLFEPQRNQSSIAAISPQLSDSQLNRVPYGTARLSHYEFTYSLQVSAGPKFLRLHFHPASYPNFHRSMSLFSVKAGPYTLLKDFNASRVSDKGGDPQKKILFMEYCIKIEQGDQRLNLTFTPNHTTHADSYAFINGIEVLSLFKSNLHCSKPNYSSFKFVSIIHETKTNLSLSGSPAGSESDCSKREKTKFVAVFCGAVVSVFILGSVIYLLCIWFRKMARTEVEVGSEEISNKSISVSSSNLCRYFSIIEIRAATINFDDIFVVGVGGFGKVYKGYIDDGTIPVAIKRFIPNCGQGVQEFKTEVEMLSQLSHPHLVSLIGFCNDEDDMIIVYDFMANGTLRDHLHGSSAKAPLSWKQRLEICIGAGLGLQYLHNGAKYSIIHRDVKSSNILLDEKWVAKISDFGLCKFGPNGISKFHVTTQVKGSLGYLDPEYSKTKWLTHKSDVYSFGVVLLEVLCGRPPLLRKVKGQERILVEWARTCHSEGPQAIDQMVDPFLRGKIVPKCLDKFIEVAMNCVVYDGNERQSMSDVVEGLELALQLQQSIEEEDPRFSRMKD 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi243g00085 627 Pfam Protein tyrosine and serine/threonine kinase 336 604 IPR001245 GO:0004672|GO:0006468
Sebi243g00085 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Sebi243g00085 627 Gene3D Transferase(Phosphotransferase) domain 1 407 624 - -
Sebi243g00085 627 Gene3D - 47 213 - -
Sebi243g00085 627 SMART serkin_6 330 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00085 627 ProSiteProfiles Protein kinase domain profile. 330 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00085 627 FunFam Receptor-like protein kinase FERONIA 407 626 - -
Sebi243g00085 627 FunFam receptor-like protein kinase FERONIA 293 406 - -
Sebi243g00085 627 SUPERFAMILY Protein kinase-like (PK-like) 306 612 IPR011009 -
Sebi243g00085 627 PANTHER OS07G0166700 PROTEIN 314 612 IPR045272 GO:0004714|GO:0006468
Sebi243g00085 627 FunFam FERONIA receptor-like kinase 46 213 - -
Sebi243g00085 627 CDD STKc_IRAK 345 606 - -
Sebi243g00085 627 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Sebi243g00085 627 Gene3D Phosphorylase Kinase; domain 1 290 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi243g00085 Sebi-Chr243 1254211 1256094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi243g00085 102 617 Receptor kinase-like Gene Family AT3G51550 42.385 1.06e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi243g00085 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi243g00085 - - adu:107486605 724.931