Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi243g00079 ATGATGTTTCTCAAGTATTTAGGTTTCTGTCGTTCGAACCATACAAGATCATCTCAGAGACAGTATCCAACTGTAATAGAAGAGCTATGCCATCAGTTTTCTCTGTCAGATATTACGAAATCAACCAACAACTTTGATAAAAATCTAATACTTGGAGAAGGAGACGCTTGTACAGTATACAAAGGATGTTTGCTGTACAATGGAACTAATGATTATACAGTCGCAATCAAACGAATTTATGCAAATACAGAAAAGGAAATCAAAGAGTTCGAAAAGGAAATTGAGATGCTCTGCCAACTTCACCATCCTAATTTGATCACTTTAATAGGATATTGTGACAGCAAAAATGAGAAGATTATTGTGTATGAGTACATGGCCAAAGGAGCTCTCTCTGATTACCTATATTATGGTATAAACAAGGAACCACTCTCATGGAAGCAAAGGGTGAAGATCTGCATAGGAACAGCACGTGGACTACACTTTCTTCACACAGGAGCCAAGCGCACCATCTTTCATCGTGACATAAGGCCTCTTAAAATTTTATTGGATAAAAATATGATGCCTAAACTGGTAGACTTGCGGTTTTCCTTGCAGGGACCTCTGTTTACATCAAAGCCAAAACCAAAGTCCATATTAAATGAGAACTTCATAGGTACATATGGTTACGTGGCCCCTGAGATTTTACAAAACAATGCAGTAACAGATAAGTGTGATGTTTACTCTTTTGGCATAGTTCTACTAGAAGTGGTATGCAAGGACAAGATAGAGCTTGTTAAGAGGCAGAGGCACCCTGTGGAGGAGAATATTGATCCGAACATCAAAGGAAAGATTGCAGCAGAGTGTTGGGAAGTGTTTGTGGATGTCACAGAGAGATGCTTGAAGCATGATCCATATGAGAGACCTGCAATGGGTGAAGTAGAGATGCAACTTGAGCTTGCTCTGTCACTGCAGGAAGAAGCTGATACCAGAAACACTGTTGGTGATCCTTACACCTTATTAACTACAACCATCATTGATCCTCCACCAGAAGAGGCGTCAATTTTAGCCAAAAAGTTAACTTGA 1062 0.3945 MMFLKYLGFCRSNHTRSSQRQYPTVIEELCHQFSLSDITKSTNNFDKNLILGEGDACTVYKGCLLYNGTNDYTVAIKRIYANTEKEIKEFEKEIEMLCQLHHPNLITLIGYCDSKNEKIIVYEYMAKGALSDYLYYGINKEPLSWKQRVKICIGTARGLHFLHTGAKRTIFHRDIRPLKILLDKNMMPKLVDLRFSLQGPLFTSKPKPKSILNENFIGTYGYVAPEILQNNAVTDKCDVYSFGIVLLEVVCKDKIELVKRQRHPVEENIDPNIKGKIAAECWEVFVDVTERCLKHDPYERPAMGEVEMQLELALSLQEEADTRNTVGDPYTLLTTTIIDPPPEEASILAKKLT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi243g00079 353 FunFam Receptor-like protein kinase ANXUR2 125 333 - -
Sebi243g00079 353 FunFam Receptor-like protein kinase ANXUR2 10 124 - -
Sebi243g00079 353 Pfam Protein tyrosine and serine/threonine kinase 50 310 IPR001245 GO:0004672|GO:0006468
Sebi243g00079 353 Gene3D Phosphorylase Kinase; domain 1 6 124 - -
Sebi243g00079 353 ProSiteProfiles Protein kinase domain profile. 45 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00079 353 PANTHER OS07G0166700 PROTEIN 29 317 IPR045272 GO:0004714|GO:0006468
Sebi243g00079 353 Coils Coil 73 100 - -
Sebi243g00079 353 SUPERFAMILY Protein kinase-like (PK-like) 20 314 IPR011009 -
Sebi243g00079 353 Gene3D Transferase(Phosphotransferase) domain 1 125 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi243g00079 Sebi-Chr243 1189940 1198007 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi243g00079 9 324 Receptor kinase-like Gene Family AT5G39000 40.597 1.10e-74 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi243g00079 PK_Tyr_Ser-Thr 7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi243g00079 - - gmx:100779112 471.855