Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi243g00076 ATGAAACGGGTTAAAGCGAAATCCAGCAAAGAGATCCTTGAATTAAAGAACGAAATTGAGTTGCTCTGTCAGCTTCGTCACCCAAATTTGATATCTCTTATAGGATTTTGTGACCACAAAGATGAGATGATTGTTGTGTATGAGTACATGCTCAATGGCAGTCTTTATGATCACCTATATTGTAGTGATACGAAAATAAAACCACTCACATGGAAGCAAAGGCTAAAGATTTGCATGGGAGCAGCATGTGGACTACACTACCTTCACACAGGAGCCAAGCGCACCATTTTTCACCGTGACATAAAACCCCATGACATTCTTTTGGATAACAATATGTTGCCAAAGCTCGGAGATTTCAGAATTTCCTTGCAAGGTCCTCGTTTTATGTCGAAGCCAAAACCAATTGAAGTAAAATCTGTTTTAGGTACTTATGGTTATATGGCTCCCGAGTATGTCATGAACAAGACCTTCACAGATAAATGTGATGTTTACTCATTTGGTATGGTTCTGCTAGAAGTGGTATGCGCAAAGGACAAACAAACAATTTTTAATAAGATGACCAAGTTAAACCATGATTTGGAACCTGTTGAAAGAGAAGATTTAGAAAGGTTCAGTGCTTGCAGTGTAGCTATAGTGCTTATACGTTCCTTTGTGGAAAGGTATCCAGTTGAGGAGATTATAGAACCAATTCTTATGGGAAAGATTGCGCCAGAATGTTGGGAAGTATTCATGGATATCATCGTAAGATGCTTGAAGTTTGATCCAAATGAGAGACCAATAATGGGTGAGGTGGAGAGGAAGCGCAATCCAACAATAATAGAAGAGCTATGCCCTCAATTTTCTCTGGCCGATCTGAGGAAATCAACCAACAACTTCGATGAGAGTCAAATAATAGGAAGAGGATACTTTAGTATAGTATATAAAGGTCGTCTCCAATACAATAGTACAGATTATACAGTTGCAGTGAAGCGAATTAAGGATTCTAAAAAAGGATTGGAAGAGTTCAAGAATGAAATTGAGTTGCTCTGCCAGCTTCGTAACCCTAATTTGGTCACTCTCATAGGATTTTGCAACCACAAAGATGAGAAGATTCTCGTGTATGATTACCTCCCTAATGGATCTCTCCGCGATCATCTATTCAATAGGGAGAAGGAATTACCACTGTCATGGAAGAAAAGGTTAGAGATCTGCATAGGAGCAGCACGCGGAGTGCACTACCTCCACACAGGAGCCAGACGCACCATCTTTCACCTTGACATCAATTTGGGAAACATTGTTTTGGATAGCAATATGATCTACGAGTGTGAGCTCCCAAGTAAAGAATTAGAAATGTCTAACCGTTCAGAAGCTTCATATGGTACTAGTATACCTTTTCACATTATGCGAAGACAGCTCATAGCTCATAGCTATATTGATGCGCCTCTAGCAGGGAAAATTGCAGCAGAGTGTTGGGAAGTATACATAGATATCATAGACGGTTGCTTGAAGGATGAACCAAATGATCGACCAACGATGGGTGAAGTGGAGGTGGAACTTGAGCGTGCTCTTACTTTGCAACTGGAGGCTGATGCCAGGAATACTACTGCTGCTGATTATTATAGCTTATTAGCCAACAGCACTACTCAAACTCACAAAGAGGAGGCGCCAATTTCAGCCTAA 1659 0.4051 MKRVKAKSSKEILELKNEIELLCQLRHPNLISLIGFCDHKDEMIVVYEYMLNGSLYDHLYCSDTKIKPLTWKQRLKICMGAACGLHYLHTGAKRTIFHRDIKPHDILLDNNMLPKLGDFRISLQGPRFMSKPKPIEVKSVLGTYGYMAPEYVMNKTFTDKCDVYSFGMVLLEVVCAKDKQTIFNKMTKLNHDLEPVEREDLERFSACSVAIVLIRSFVERYPVEEIIEPILMGKIAPECWEVFMDIIVRCLKFDPNERPIMGEVERKRNPTIIEELCPQFSLADLRKSTNNFDESQIIGRGYFSIVYKGRLQYNSTDYTVAVKRIKDSKKGLEEFKNEIELLCQLRNPNLVTLIGFCNHKDEKILVYDYLPNGSLRDHLFNREKELPLSWKKRLEICIGAARGVHYLHTGARRTIFHLDINLGNIVLDSNMIYECELPSKELEMSNRSEASYGTSIPFHIMRRQLIAHSYIDAPLAGKIAAECWEVYIDIIDGCLKDEPNDRPTMGEVEVELERALTLQLEADARNTTAADYYSLLANSTTQTHKEEAPISA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi243g00076 552 SUPERFAMILY Protein kinase-like (PK-like) 1 266 IPR011009 -
Sebi243g00076 552 Gene3D Phosphorylase Kinase; domain 1 1 50 - -
Sebi243g00076 552 PANTHER OS07G0166700 PROTEIN 468 519 IPR045272 GO:0004714|GO:0006468
Sebi243g00076 552 ProSitePatterns Protein kinases ATP-binding region signature. 298 323 IPR017441 GO:0005524
Sebi243g00076 552 Pfam Protein tyrosine and serine/threonine kinase 295 432 IPR001245 GO:0004672|GO:0006468
Sebi243g00076 552 Gene3D Transferase(Phosphotransferase) domain 1 370 436 - -
Sebi243g00076 552 ProSiteProfiles Protein kinase domain profile. 292 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00076 552 Gene3D Phosphorylase Kinase; domain 1 265 369 - -
Sebi243g00076 552 Gene3D Transferase(Phosphotransferase) domain 1 437 522 - -
Sebi243g00076 552 Pfam Protein kinase domain 2 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00076 552 Gene3D Transferase(Phosphotransferase) domain 1 52 264 - -
Sebi243g00076 552 FunFam Receptor-like protein kinase ANXUR2 261 369 - -
Sebi243g00076 552 ProSiteProfiles Protein kinase domain profile. 1 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00076 552 SUPERFAMILY Protein kinase-like (PK-like) 272 508 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi243g00076 Sebi-Chr243 1155588 1158628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi243g00076 279 519 Receptor kinase-like Gene Family AT2G39360 34.915 1.87e-45 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi243g00076 Pkinase 5.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi243g00076 - - adu:107486597 476.478