Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi243g00075 ATGGTTCTCAAATGTTTGGGTTTGTGCCGTTCATCTCAGAGGCAGAGGCAGTATCCAACAGTAATAGAAGAGCTATGCCATCATTTTTCTCTTTCAGATATTAGGAAATCAACCAACAACTTTGATAAAAATCTAATAATTGGAGAAGGAGGCTGTGGTAAAGTATATAAAGGTTATCTCCAACTTGATGTTGGAGCAGATGGTACAGTAGCGGTGAAGCAAATGAGTGGTGCTTCTCTATATGCATCGGAAGGGTTCAAGAAGGAAATTGAGTTGCTCTGCCAGCTTCATCACCCTAATTTGATCTCTCTCAAAGGATTCTGCAACCACAAAAATGAGAAGATTATTGTGTATGAGTACATGCCCAATGGATCTCTGCATGATCACCTACACAATAAGGACATGGAACCACTGTCATGGAAGAAAAGGCTAGAGATTTGTATAGGAGTAGCACGTGGGGTGCACTATCTCCACACAGGAGCCAGACGCACCATCATTCACCGTGACATCAAACCCAGCAATATTCTTTTGGATAGCAACATGGTGGCCAAGATCTCAGATTTTGGGTTTTCCTTACAGGGAGCACTGTCTACTTCAAAACCAAAACCTATTCAAAAACCTCTAGCAGGTACAGTTGGTTTCTTGGCTCCTGAGGTTTTCTTGGATACTTGTGTCGGCTGGACAGATCGATGTGACGTTTACTCCTTTGGAGTGGTTCTATTAGAAGTGATATGTGCAAAGACATGTGTGACAATTACAATGGAGATGAGGGGTTTAGATGGTGCTATGAGCAAGCTCCCACATGAAGAATCAGAAAATGTTCGCCCTGCATTTCATCCTTATGTCATTTCAAGGCTTCGAGCTGAGGAGATTATTGATCCGACTCTCACAGGAAAAATTGCACTAGAATGTTGGGAAGTATTCATAGATATCATAGACGGCTGCTTGAATGAAGAACCAAATGAACGACCAACAATGGGTGAAGTGGAGGTGGAACTTGAGCGTGCCCTTACTTTGCAATTGGAAGCAGACGCCAGGAATACTGGTGGCGATCATTATAGCTTATCATCCACCAAGAGGCGCAAATTGCAGTCTAAAATAAATTAA 1107 0.4237 MVLKCLGLCRSSQRQRQYPTVIEELCHHFSLSDIRKSTNNFDKNLIIGEGGCGKVYKGYLQLDVGADGTVAVKQMSGASLYASEGFKKEIELLCQLHHPNLISLKGFCNHKNEKIIVYEYMPNGSLHDHLHNKDMEPLSWKKRLEICIGVARGVHYLHTGARRTIIHRDIKPSNILLDSNMVAKISDFGFSLQGALSTSKPKPIQKPLAGTVGFLAPEVFLDTCVGWTDRCDVYSFGVVLLEVICAKTCVTITMEMRGLDGAMSKLPHEESENVRPAFHPYVISRLRAEEIIDPTLTGKIALECWEVFIDIIDGCLNEEPNERPTMGEVEVELERALTLQLEADARNTGGDHYSLSSTKRRKLQSKIN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi243g00075 368 Pfam Protein tyrosine and serine/threonine kinase 46 331 IPR001245 GO:0004672|GO:0006468
Sebi243g00075 368 Gene3D Phosphorylase Kinase; domain 1 6 120 - -
Sebi243g00075 368 SMART serkin_6 41 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00075 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Sebi243g00075 368 FunFam Os07g0541700 protein 121 211 - -
Sebi243g00075 368 SUPERFAMILY Protein kinase-like (PK-like) 16 332 IPR011009 -
Sebi243g00075 368 Gene3D Transferase(Phosphotransferase) domain 1 121 354 - -
Sebi243g00075 368 PANTHER OS07G0166700 PROTEIN 25 340 IPR045272 GO:0004714|GO:0006468
Sebi243g00075 368 ProSiteProfiles Protein kinase domain profile. 41 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi243g00075 368 FunFam Receptor-like protein kinase ANXUR2 5 120 - -
Sebi243g00075 368 MobiDBLite consensus disorder prediction 348 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi243g00075 Sebi-Chr243 1151171 1152346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi243g00075 24 347 Receptor kinase-like Gene Family AT5G39000 44.954 3.93e-78 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi243g00075 PK_Tyr_Ser-Thr 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi243g00075 - - adu:107486597 387.497