Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi243g00074 ATGGCCCAATCGTTCGGTCAGACCGAGATTAACTGGGAGAAGCTAGATAAAACTAAGTTCTATGTGGTAGGAGCTGGACTGTTTACAGGTGTTACTGTGGCACTTTACCCAGTTTCAGTTGTGAAAACTAGGCTGCAGGTTGCTACAAAGGATGCTGTAGAGAGAAATGCATTTTCTGTTGCAAAGGGATTGGTTAAAACTAATGGCATCCCTGGTTTGTATAGAGGGTTTGGCACAGTTATCACAGGTGCAATTCCAGCCAGAGTCCTATTCCTCACTGCTCTAGAGACCACAAAGGTGGCTGCCTTTAGAATGCTGGAACCGTTTAGACTATCTGAAACTACCCAAGCTGCCATAGCCAATGGAGTTGCAGGCATGACATCGTCGCTTTTTGCTCAATTTGTGTTTGTTCCGATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAATACCGTGGGGGTTTGGATGTTGCTCGTAAGGTTTTAAGGTCTGATGGCATCCGGGGACTGTATCGAGGGTTTGGTCTCTCGGTTGTTACTTATTCACCTTCTAGTGCAGTATGGTGGGCAAGTTATGGTTCAAGCCAACGCTTCATTTGGAGATTCTTGGAACATGGTGCCAAAAATGATGAAGGCACTCCTAGTCTGCAGAAGATAATGTTAGTTCAGGCTTCTGGAGGGATTATTGCTGGTGCAACTGCATCCTGCATTACAACCCCGTTGGATACTATCAAGACACGATTACAGGTTTGCACAATCTTGTAG 783 0.4572 MAQSFGQTEINWEKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATKDAVERNAFSVAKGLVKTNGIPGLYRGFGTVITGAIPARVLFLTALETTKVAAFRMLEPFRLSETTQAAIANGVAGMTSSLFAQFVFVPIDVVSQKLMVQGYSGHAQYRGGLDVARKVLRSDGIRGLYRGFGLSVVTYSPSSAVWWASYGSSQRFIWRFLEHGAKNDEGTPSLQKIMLVQASGGIIAGATASCITTPLDTIKTRLQVCTIL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi243g00074 260 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 260 IPR018108 -
Sebi243g00074 260 Pfam Mitochondrial carrier protein 25 100 IPR018108 -
Sebi243g00074 260 Pfam Mitochondrial carrier protein 229 256 IPR018108 -
Sebi243g00074 260 Pfam Mitochondrial carrier protein 118 205 IPR018108 -
Sebi243g00074 260 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Sebi243g00074 260 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Sebi243g00074 260 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Sebi243g00074 260 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Sebi243g00074 260 Gene3D Mitochondrial carrier domain 21 259 IPR023395 -
Sebi243g00074 260 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 257 - -
Sebi243g00074 260 SUPERFAMILY Mitochondrial carrier 13 258 IPR023395 -
Sebi243g00074 260 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi243g00074 Sebi-Chr243 1145033 1147685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi243g00074 10 256 Chloroplast and Mitochondria Gene Families AT5G15640 75.403 6.95e-136 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi243g00074 K15121 - gmx:100782750 456.447