Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi243g00045 ATGGTGAAGGTGGATGAACCCAACACGGGGAAGAGGGTGAACCCTCATCGTTCAAAGCATTCAGAGACTGAGCAGCGTAGAAGGAGTAAAATTAACGAAAGATTTCAGGTTCTGAGAGATCTCATACCTCAAAATGATCAAAAAAGAGATAAGGCATCCTTTTTGTTGGAGGTTATTGAGTATATTCAGTTCCTACAAGAAAAGTTACAAATTTATGAACAGACTTATGAAGGATGGAATCAGGAGCCGACAAAATTAATTCCATGGAGAAATCATAATGGGCCTGCAGAAAATACTATAGATCCTTCTCAAGCTATTCAAAATGGGTCTATTCATGAGAAAAATAATGATGTCTCTTCATCATTGCCCAAAAATGTGCAGAACCCATTGGAGTCTGACTTCTCAACGACAACTATTCAGAAGGGCCACAGCCCTGGTTCAGCTACAGAAGCTGTTCCCCTGGCCATGCAAATGCGATTGGACATGTTTGATCCAGTTGTTAGCAGCGGTAATGTAACCCAACATATGCAGGGACCTGTATCTTATGCTGACATGCCTTCTCGTACCCAGCCTCAAGCGTGGCTTAGTAAACCAAGTAAGAGCAACTATATTGTTCCAGATAATACATTGAAAGAACAGGAGGAGCTGACAATTGAAAGTGGATCAGATAGCATCTCAAGTGCCTATTCCCAGGAAATATTGGATACTCTCACACAAGCGCTGCAGTCTTCAGGTGTGGATTTGTCCCAGACAAGTGTCTCAGTGCAAATTGATGTTGGTAGACGATCAAATTCTAGGTTGAACCCCTCAGCATATAGCTCAAAGCTGAGGGAGAGGGGGATTGGATGGGTCAGGTACAAAAATGGAGTTGAGTTCGCCAATGCTACATAA 891 0.4254 MVKVDEPNTGKRVNPHRSKHSETEQRRRSKINERFQVLRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLQIYEQTYEGWNQEPTKLIPWRNHNGPAENTIDPSQAIQNGSIHEKNNDVSSSLPKNVQNPLESDFSTTTIQKGHSPGSATEAVPLAMQMRLDMFDPVVSSGNVTQHMQGPVSYADMPSRTQPQAWLSKPSKSNYIVPDNTLKEQEELTIESGSDSISSAYSQEILDTLTQALQSSGVDLSQTSVSVQIDVGRRSNSRLNPSAYSSKLRERGIGWVRYKNGVEFANAT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi243g00045 296 Gene3D - 14 86 IPR036638 GO:0046983
Sebi243g00045 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 15 65 IPR011598 GO:0046983
Sebi243g00045 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 92 IPR036638 GO:0046983
Sebi243g00045 296 SMART finulus 21 71 IPR011598 GO:0046983
Sebi243g00045 296 MobiDBLite consensus disorder prediction 1 31 - -
Sebi243g00045 296 CDD bHLH_AtBIM_like 17 90 - -
Sebi243g00045 296 FunFam BHLH domain class transcription factor 13 85 - -
Sebi243g00045 296 Pfam Helix-loop-helix DNA-binding domain 17 66 IPR011598 GO:0046983
Sebi243g00045 296 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 2 277 IPR044295 GO:0003700|GO:0006351|GO:0046983
Sebi243g00045 296 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi243g00045 Sebi-Chr243 640231 645315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi243g00045 17 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 41.577 1.27e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi243g00045 HLH 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi243g00045 - - gmx:100791730 459.529