Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi242g00033 | ATGCATTGCTATGGCTATGGATTAACAACTGTAACAATCCCATTTCCACCAATGGTAAGTGATTGTCGTTTTTGCTTCTGCCTCCACGCGGCAAATCCCATACCTTTTTCCGGTAACAGATCCGAACCCGTAAAACTCCTGACCCGAAACCGTGCGGGTTCACTCAGGGTGAGAGCTTCGGTTAGTGATGACGTTTTCGTAGCTTCCCGGTCCCAATTGAGCTTCTACGAGCTTCTGGGTGTACCTGAATCCGGGTCATCGGTGGAGGTGAAACACGCGTATAAGCAACTGGCCCGGAAATACCACCCGGATGTGTCGCCACCGGGTCGGGTCGAGGAGTACACGAAGAGGTTTATTATGGTGCAGGAGGCCTACGAGACATTGTCTGATCCAGCAAGGAGAGCTATGTATGATAGAGACATGGCTAATGGGCTTCACCTTGCCTTCTCCTCTCGCAGACGCTATAACTACCGTGGTGTTGATGATCAGTTGTTTCTGAAGTTGATTGCTGACATATTGAGGTTGTCTACTTTATTCTGA | 540 | 0.4926 | MHCYGYGLTTVTIPFPPMVSDCRFCFCLHAANPIPFSGNRSEPVKLLTRNRAGSLRVRASVSDDVFVASRSQLSFYELLGVPESGSSVEVKHAYKQLARKYHPDVSPPGRVEEYTKRFIMVQEAYETLSDPARRAMYDRDMANGLHLAFSSRRRYNYRGVDDQLFLKLIADILRLSTLF | 179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi242g00033 | 179 | Gene3D | DnaJ domain | 62 | 160 | IPR036869 | - | |
Sebi242g00033 | 179 | ProSitePatterns | Nt-dnaJ domain signature. | 118 | 137 | IPR018253 | - | |
Sebi242g00033 | 179 | PRINTS | DnaJ domain signature | 94 | 109 | IPR001623 | - | |
Sebi242g00033 | 179 | PRINTS | DnaJ domain signature | 76 | 94 | IPR001623 | - | |
Sebi242g00033 | 179 | PRINTS | DnaJ domain signature | 133 | 152 | IPR001623 | - | |
Sebi242g00033 | 179 | PRINTS | DnaJ domain signature | 113 | 133 | IPR001623 | - | |
Sebi242g00033 | 179 | SMART | dnaj_3 | 73 | 133 | IPR001623 | - | |
Sebi242g00033 | 179 | Pfam | DnaJ domain | 75 | 138 | IPR001623 | - | |
Sebi242g00033 | 179 | CDD | DnaJ | 75 | 130 | IPR001623 | - | |
Sebi242g00033 | 179 | ProSiteProfiles | dnaJ domain profile. | 74 | 141 | IPR001623 | - | |
Sebi242g00033 | 179 | FunFam | Chaperone protein dnaJ 20, chloroplastic | 60 | 164 | - | - | |
Sebi242g00033 | 179 | SUPERFAMILY | Chaperone J-domain | 72 | 150 | IPR036869 | - | |
Sebi242g00033 | 179 | PANTHER | CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC | 56 | 157 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi242g00033 | Sebi-Chr242 | 762614 | 763244 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi242g00033 | 68 | 138 | C2H2 Transcription Factor Family | AT1G74250 | 41.333 | 9.49e-09 | 52.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi242g00033 | - | - | qsa:O6P43_023570 | 168.703 |