Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi242g00032 ATGGTGGCGTTTGGTATGAGGAATCTTTCATTCTCAACTAAACCACATTCCAGAAATCTCATTTCCAGGAATGGGATTCCTGCCAATTTTTATGACAAAGGATTTCCAGGACAAGCTCAGGTTCCTAATGCAGGTAAACTACATCAAAAGGAAATCAAGCAAAATGATAAGAAGAATGCCTTGTTTGAGGATAGACTTAACAAACAGTATGCCAGTAACAATGGAGAGAAGGCCAGAGAGAATAATCATCTGGCTGAGGAGAACAATGATTCTAAATTCCTCCTGGAGTTGGACAGGAGGATTAGGGACAATGGAGGAGCGGGGAATCAATTGGTTCAAAAGGTTACAATTGCAGACCATCATAGAAAGGATGAGGGGGCTGTTAGGTTGGTTGCCAAGAGTGGTGGCACCTGGCCTGATGGTAAGGAAAAGCTCCAGGATAAGGGTATTAATGCTGGGAAGATTGATGGAAGAGGAATCTGGGCTGAGGCGCGACCTATTGGAAATGCAGCAGTTTCCAGGCACAGCCATGAGAATTCTATCATTGGGGAAAATCTCAAGAAACGGAAGGACATTGAATCAAATGGAGTTCTGCATGCCAATGATAATTGGCCCAGTAAGTTGCCAAGACCTTCTTCCTCTCATCCTTTCACTGAAAATGGAAGGATATTGGAGCCTTGCCAAATTTCCTTTCCGAATGCTTCAGATAGGCTAGGAGCATCCACTAATGTTAAGGTGGAGAACAAGGAGCGCAAGATAAATGGAATCATTGAAGCTCTACCACCTGCAATTTCCTCAATCAAGACTCCTGCTGCTACTGTGCCAGCTGATCCAGTGGCTGAAGCACCTACAAAACCGCCCCATCCAGCTGATCCAGTGACTGAAGCACCAACAAAACCACCCCATCCAGATACCAAGTACCTACGTCAGGTATATTCTGTACCCAAAACAGATGAATGGTCTGGTTTTGACGACCAAGAGTGGTTGTTTGGCAGCAGTTCACAAGAAAAAAGACCTGTGGGGAAATCGTCAGAGGCTGGGGATACACTGCAGTGGCGTGCGGTACTTGAAAAATATCTGCACAAGGAACCCTCCATTGGCTCACCTATTTGGGAGGAACAGCAGCATCTGGGGCTAGAAATTGATTCCAAACTGTCTGATGCATTCTTTTGTTATTTGCACTCCAGCAACAAGGAAACATCTGCACAAGTGATTGCCATGCTTGGTGCATTGCTGCAGGTCTGGTTGGGGGATGTAGTTCTCACTTCACTCATCATAGTAATTCATTTACAGAGTAGAGTTCATAAAGGCAGCTCCAGTGATCATTCATTCATCATCTTCGTCAACATGAGAATGTTGCCTGTTTGCTCAGCCACCCCGTGCTATTCCTCGTCTTCTCAGATTCCCTTGTTTGGGGGGTTGCTACCCCTGTGCCCAGTTCGAAAGGATCTTGATAGCAGATGTGTGGCAGAAGAAGGTGTATATCTGGGTTTGCAATATGGAACACACACAGCTAGAAGTTCATTTACAGCACAAGCTACAAAGACTGTCTCGGGTAGTTTTTCCCCTCCAAGTGAACAAGGATACCTTACAAACACATGGGGTCATTCACTGAGTAATGGAGAACTCAGACACATAGAAAGATATAATTTGTCTACTGTGCCAGAGGAACTTGTAGACATTGCAAAAGAGTCAACTGAAGGAACTAATACATTAGTAGCACCGGCACAACCAGAAATACTATCTAGTACTGATATAATGCCAGAGAAGTTTGAATCAGTATCCAGTTCAATTGATGTGGATAATGAATCTTTAGCCAGTACAAAAGCAAGTGTTGGTGACCTTATTGCTGGAATCAATGAGTCATTCAATGACTCAATTAGTAAGGGAGAAAATGCTTTACGAAGCTCACTGGATACAGCCACTTCTTTTATAGATTCTATTGTTGAAAATGCTAATAAATCTGCAGATAATGCATTTAGTAAGGCATTTTCTGCTGTTGATCAAACGGGGGAAGTAGCAAATAAGAAATTAACTAGCTTTTCAAGTGAGCTGAGTGGAGTCACAAACAAAGCACCTGCTTTGGCCATTGATGTGTTGCGCCGCACAATCATAGCAGTAGAGAGTTCTCTAGCAAGTGGAGCTTCCTATGTTGTTTACCTATATGGCTCAGCCAAGGAGCTCCTTCCTGCAGATATTAGGGATACAGTCAATGTATATGAAGATAAAGCAACAGAAATCTTGAGGCCTGTTGGGCCTGCAACTCAAAAGATATACATAACTTTCTATTCATTGGAGAAGAGTCTTGGATTGGATCCAAATGACCCAATTATTCCATTTCTTGTTTTTGTGGGCTCTTCAGCAACATTATGGGCTGTTTATTGGTTGTGGACATATGGTGGTTATTCAGGAGATTTATCCCCTAAATCAGCTTTGGAGCTTTTGACTGGGGACAAAAATGCTGCACTTATAGATGTCCGCACTGAGGATTTGCGAGAAAAAGATGGTATTCCTGATCTTCGACGGGCTGCTCGGTTTCGCTATGCAAGTGTAACTCCACTTGAGGTTGATGGCTCTACACGTAAGTTGTTGAAGAGTGGTAGAGACCTGGATGACTCTTTGACTGCTGCTATTATTCGAAATTTGAAGATTGTTAAGGACAGTTCCAAGGTTATAGTGTTGGATGCGGATGGTACTCGTTCTAAAGGCATTGCGAGATCCTTGAGGAATATTGGGGTCAAGAATCCATACTTGGTTCAAGGTGGATTTCAGTCATGGATGAAACAAAGCCTCCGCGTCAAGGAACTCAAACCTGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTAGAGGATGTTAATCCTTCCCCTTTGCAACTTTTAGGTTATGGTACGGTACTTATTGCGGGGTTCTATGCATTGTTAGAGTGGGAGAAGACATTACAGTTAATTGGTCTGTTTGGCCTCAGTTTGACCATCTATCTGCGGGTTTCTTCATATGAAAACTCAGAAGATTTGAAGCAAGATGTGAGGTTGTTGCTTGTTCCTGTTAGACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAATTGGAATCAAATCGCATAGGGCTACCTACATCACCTTCATCATTAGATGTTCAGAACCGGGTGTTGCAGGCTGCTGCCAAACATGAATCTCAACCATCTGATAGTGAAGGCAACCAAGATCCAGTTTCTGAATCAACAGTTCCTCTCAATCAGAATGTATGA 3261 0.4321 MVAFGMRNLSFSTKPHSRNLISRNGIPANFYDKGFPGQAQVPNAGKLHQKEIKQNDKKNALFEDRLNKQYASNNGEKARENNHLAEENNDSKFLLELDRRIRDNGGAGNQLVQKVTIADHHRKDEGAVRLVAKSGGTWPDGKEKLQDKGINAGKIDGRGIWAEARPIGNAAVSRHSHENSIIGENLKKRKDIESNGVLHANDNWPSKLPRPSSSHPFTENGRILEPCQISFPNASDRLGASTNVKVENKERKINGIIEALPPAISSIKTPAATVPADPVAEAPTKPPHPADPVTEAPTKPPHPDTKYLRQVYSVPKTDEWSGFDDQEWLFGSSSQEKRPVGKSSEAGDTLQWRAVLEKYLHKEPSIGSPIWEEQQHLGLEIDSKLSDAFFCYLHSSNKETSAQVIAMLGALLQVWLGDVVLTSLIIVIHLQSRVHKGSSSDHSFIIFVNMRMLPVCSATPCYSSSSQIPLFGGLLPLCPVRKDLDSRCVAEEGVYLGLQYGTHTARSSFTAQATKTVSGSFSPPSEQGYLTNTWGHSLSNGELRHIERYNLSTVPEELVDIAKESTEGTNTLVAPAQPEILSSTDIMPEKFESVSSSIDVDNESLASTKASVGDLIAGINESFNDSISKGENALRSSLDTATSFIDSIVENANKSADNAFSKAFSAVDQTGEVANKKLTSFSSELSGVTNKAPALAIDVLRRTIIAVESSLASGASYVVYLYGSAKELLPADIRDTVNVYEDKATEILRPVGPATQKIYITFYSLEKSLGLDPNDPIIPFLVFVGSSATLWAVYWLWTYGGYSGDLSPKSALELLTGDKNAALIDVRTEDLREKDGIPDLRRAARFRYASVTPLEVDGSTRKLLKSGRDLDDSLTAAIIRNLKIVKDSSKVIVLDADGTRSKGIARSLRNIGVKNPYLVQGGFQSWMKQSLRVKELKPETALSILNEEAEAILEDVNPSPLQLLGYGTVLIAGFYALLEWEKTLQLIGLFGLSLTIYLRVSSYENSEDLKQDVRLLLVPVRLGAQAFSWAAGKLESNRIGLPTSPSSLDVQNRVLQAAAKHESQPSDSEGNQDPVSESTVPLNQNV 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi242g00032 1086 ProSiteProfiles Rhodanese domain profile. 817 935 IPR001763 -
Sebi242g00032 1086 Gene3D - 802 944 IPR036873 -
Sebi242g00032 1086 MobiDBLite consensus disorder prediction 1058 1086 - -
Sebi242g00032 1086 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 452 1083 IPR044690 GO:0009704|GO:0071277|GO:0090333
Sebi242g00032 1086 MobiDBLite consensus disorder prediction 280 299 - -
Sebi242g00032 1086 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 790 933 IPR036873 -
Sebi242g00032 1086 Pfam Rhodanese-like domain 808 928 IPR001763 -
Sebi242g00032 1086 CDD RHOD 812 926 - -
Sebi242g00032 1086 SMART rhod_4 807 932 IPR001763 -
Sebi242g00032 1086 MobiDBLite consensus disorder prediction 275 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi242g00032 Sebi-Chr242 728917 743595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi242g00032 779 896 Sulfurtransferasese or Rhodanese AT5G23060 29.365 1.24e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi242g00032 - - gmx:100786123 1035.4