Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi242g00020 ATGGCCATGGATGTAGATAAGAATCAAATTTCGCTTGGTTGGAAACAAAGACTTCAAATTGCTCTGGATTCTGCAGTAGGTTTGGAATATCTACATAATGGTTGTACCCCCCAAATTGTACATAGAGATGTTAAGACTAGCAACATTTTACTTGATGAAGATTTTCGTGGTAAAATATCAGATTTTGGGTTATCAAGAATCTTTTCTGATGAATGTGACACCCATGTGTCAACAATAATTGCTGGCACCCCTGGTTATCTCGATCCTGAATACTACAAAACAAACAAGTTGACTGAAAAGAGTGATGTATTTAGTTTTGGAATTGTTCTCTTAGAAATAATCACAGGGCAGCCTGTTATATTAAAAACTCATGAGAACACTCACATAATTCAATGGGTAAGTTCCATATTAGATGTTAAAAGAGAAATTGATACTATTATAGATTCAAGGTTACAAGGAAGATATGACATAGAGACTGCAAAGAAAGTCCTACATGTTGCAATGGCTTGTGTAGCTACGACTTCTATTCACAGGCCAACAATGAATCAAGTGATGATAGAATTAAGTCAATGTTTGTCCATGGAGAATATTAGCAGTACATCCAATGAAACATCGATGGAGCCTATCAGTGGAGAGAGTTCTCTTGCAAGGTAG 654 0.3609 MAMDVDKNQISLGWKQRLQIALDSAVGLEYLHNGCTPQIVHRDVKTSNILLDEDFRGKISDFGLSRIFSDECDTHVSTIIAGTPGYLDPEYYKTNKLTEKSDVFSFGIVLLEIITGQPVILKTHENTHIIQWVSSILDVKREIDTIIDSRLQGRYDIETAKKVLHVAMACVATTSIHRPTMNQVMIELSQCLSMENISSTSNETSMEPISGESSLAR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi242g00020 217 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 2 201 - -
Sebi242g00020 217 Pfam Protein kinase domain 16 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi242g00020 217 SUPERFAMILY Protein kinase-like (PK-like) 9 199 IPR011009 -
Sebi242g00020 217 SMART serkin_6 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi242g00020 217 Gene3D Transferase(Phosphotransferase) domain 1 3 213 - -
Sebi242g00020 217 PANTHER OS07G0107800 PROTEIN-RELATED 11 195 - -
Sebi242g00020 217 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi242g00020 217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Sebi242g00020 217 MobiDBLite consensus disorder prediction 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi242g00020 Sebi-Chr242 374875 375800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi242g00020 12 207 Receptor kinase-like Gene Family AT1G51800 56.158 3.06e-75 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi242g00020 Pkinase 3.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi242g00020 - - aprc:113851009 319.701