Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi242g00010 ATGAATTATATGGTAGAAAGATGCGGGATTGGGTATGAAGAGCATAATGAGTGGTATTTCATTAGCCACAAAGATAAGAAGTATCCAAGAGGGATAAGAACTAACAGAGCTGCAATGGTTAGGTTCTGGAAGGCAATAGAAAGAGATAAGGCAATGTATGATAAGATGAAACTAATTAGGATGAGGAAGACCCTTGTTTAA 201 0.3682 MNYMVERCGIGYEEHNEWYFISHKDKKYPRGIRTNRAAMVRFWKAIERDKAMYDKMKLIRMRKTLV 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi242g00010 66 Gene3D NAC domain 3 66 IPR036093 GO:0003677|GO:0006355
Sebi242g00010 66 SUPERFAMILY NAC domain 12 66 IPR036093 GO:0003677|GO:0006355
Sebi242g00010 66 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 66 - -
Sebi242g00010 66 Pfam No apical meristem (NAM) protein 14 66 IPR003441 GO:0003677|GO:0006355
Sebi242g00010 66 ProSiteProfiles NAC domain profile. 1 66 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi242g00010 Sebi-Chr242 177609 177809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi242g00010 4 66 NAC Transcription Factor Family AT2G18060 74.603 1.04e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi242g00010 - - ming:122083745 106.686