Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi240g00032 ATGGAGCTTGTTCGTGGTGGTGAGCTCTTCAACAAGGTAGCCAAAGGTCGATTGAAAGAAGACCTCGCCAGAGTCTACTTTCAGCAGTTAATCTTCGTCGTTGATTTCTGCCACAGCCGCGGCGTTTACCACCGTGACCTCAAGCCGGAGAATCTTCTCCTTGACGAAGATGGGAACCTTAAGGATGATCATTTGGTTGCTATGTATAAGAAGATTTACAGGGGTGACTTTAAATGTCCACCTTGGTTCTCTGTGGAAGCTCGAAGGCTTGTTACCAAGCTTCTAGATCCGAATCCGAATACTCGAATAACAATTTCAAAGATCATGGACTCGTCTTGGTTCAAGAAACCGGAGCCGAAGAGCATGATGACGGCGAGAAGGAAAGAGGAAGAGGCGTTTGATTTTGAGAAGTCGAATGTGCCAACAACGATGAACGTGTTTCACATAATTTCGCTTTCGGAAGGGTTTGATTTGTCGTCGTTGTTTGAGGAGAAGAAGAGAGTGGAGAGGGAGGAGCTGAGGTTCGCGACGGCGGGGACACCGAGCAGAGTGATATCGAGGTTGGAGGAGGTGGCGAAGGCGGAGCGTGGGAGGAAGGGGAAGTTGGCTATTGCGGCGGATATTTACGCCGTGACGCCGTCGTTTATGGTGGTGGAGGTGAAGAAGGATAATGGTGACACTTTGGAGTATAATCAGTTCTACAGCAAAGAGCTTCATCCTACGCTTAAAGATATCTTTTGGACTTCCTCTGAGAAAAGTGCTGAGATTTTCATTTAG 777 0.4775 MELVRGGELFNKVAKGRLKEDLARVYFQQLIFVVDFCHSRGVYHRDLKPENLLLDEDGNLKDDHLVAMYKKIYRGDFKCPPWFSVEARRLVTKLLDPNPNTRITISKIMDSSWFKKPEPKSMMTARRKEEEAFDFEKSNVPTTMNVFHIISLSEGFDLSSLFEEKKRVEREELRFATAGTPSRVISRLEEVAKAERGRKGKLAIAADIYAVTPSFMVVEVKKDNGDTLEYNQFYSKELHPTLKDIFWTSSEKSAEIFI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi240g00032 258 Pfam Protein kinase domain 1 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi240g00032 258 FunFam Non-specific serine/threonine protein kinase 139 247 - -
Sebi240g00032 258 Gene3D Transferase(Phosphotransferase) domain 1 1 61 - -
Sebi240g00032 258 Gene3D Kinase associated domain 1, KA1 142 194 - -
Sebi240g00032 258 Gene3D Kinase associated domain 1, KA1 195 248 - -
Sebi240g00032 258 SUPERFAMILY Protein kinase-like (PK-like) 1 122 IPR011009 -
Sebi240g00032 258 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi240g00032 258 CDD CIPK_C 145 243 - -
Sebi240g00032 258 SMART serkin_6 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi240g00032 258 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 61 - -
Sebi240g00032 258 ProSiteProfiles NAF domain profile. 139 163 IPR018451 GO:0007165
Sebi240g00032 258 Pfam NAF domain 141 196 IPR004041 GO:0007165
Sebi240g00032 258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 42 54 IPR008271 GO:0004672|GO:0006468
Sebi240g00032 258 Gene3D Transferase(Phosphotransferase) domain 1 62 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi240g00032 Sebi-Chr240 1138075 1139084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi240g00032 1 250 CBL-interacting serine-threonine protein kinases AT4G30960 46.921 2.89e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi240g00032 Pkinase 1.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi240g00032 - K07198 var:108321114 332.798