Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00240 GTGCTGAAGGGTTTAATGTATCTTCATCATGAGAAACATATTATCCACAGGGACATGAAAACTTCTAATCTGCTGATAAATCATAGAGGGGAGCCAGAGAGAATAATAGGAAGCCAGAATGGGCACATGTACAACTACAAAAGTGATATATGGAGCTTTGGATTGATGTTGCTCGAGTGTGCTACAGGGAGGTTTCCATATACACCACCAGATCAAAGTGAAGGGTGGGAAAATATGTTCCAGCTTATTGAAGCCATTGTTGAAAAACCTTCACCTAGTGCCCCAGCTGATGAATTTTCTCCAGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAAATCCAAGGGATAGACCATCAGCTCTGGACCTTATGAGGCATCCTTTTATCACCATGTATGACGACTTGGATGTGGATCTTTCAGCTTATTTCTCCAATGCGGGATCTACACCTGCAACCATATAA 465 0.4108 VLKGLMYLHHEKHIIHRDMKTSNLLINHRGEPERIIGSQNGHMYNYKSDIWSFGLMLLECATGRFPYTPPDQSEGWENMFQLIEAIVEKPSPSAPADEFSPEFCSFISACLQKNPRDRPSALDLMRHPFITMYDDLDVDLSAYFSNAGSTPATI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00240 154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 14 26 IPR008271 GO:0004672|GO:0006468
Sebi23g00240 154 Gene3D Transferase(Phosphotransferase) domain 1 1 151 - -
Sebi23g00240 154 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 1 31 - -
Sebi23g00240 154 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi23g00240 154 Pfam Protein kinase domain 32 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi23g00240 154 SUPERFAMILY Protein kinase-like (PK-like) 1 135 IPR011009 -
Sebi23g00240 154 SMART serkin_6 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00240 Sebi-Chr23 3159247 3160392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00240 1 149 MAP Kinase Kinase Gene Family AT4G26070 53.631 1.64e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Sebi23g00240 Pkinase 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00240 K20603 - gmx:100789241 243.432