Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00239 ATGAAGAAAGGAAGCTTAGGCCCCAGTCTCAAACTCACTGTTCCTGCATCTGATCAGGATTCTTTTGCCAAGTTCCTGACTGAAAGCGGGACGTTCAGGGATGGGAACCTACTTGTCAATAGGGATGGAGTTCAAATTGTCTCTCAGAGTGAAGTGGAAACTCAACCCCCAATCAGGCCAACAGACAACCAGTTAAATTTGGCAGACATTGATACAATCAAAGTGATTGGAAAGGGTAATGGCGGGATAGTGCAATTGGTGCAACACAAATGGACTAATCAGTTTTTCGCATTAAAGAGAATTCAAATGAATATTGAGGAGTCTGAGTGCAGGCAAATAGCAAAAGAGCTAAAAATCAATCAATCAGCACAATGTCCTTATGTTGTTGTCTGGTACCAGTCATTCTATGAAAATGGTGCCATATCAATAATCTTAGAGTACATGGATGGAGGGTCTTTAGAGGATCTTCTGAAAAAAGTTAAAACAATTCCAGAGCCATATCTTGCTGCCATCTGTAAGCAG 522 0.4119 MKKGSLGPSLKLTVPASDQDSFAKFLTESGTFRDGNLLVNRDGVQIVSQSEVETQPPIRPTDNQLNLADIDTIKVIGKGNGGIVQLVQHKWTNQFFALKRIQMNIEESECRQIAKELKINQSAQCPYVVVWYQSFYENGAISIILEYMDGGSLEDLLKKVKTIPEPYLAAICKQ 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00239 174 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Sebi23g00239 174 Pfam Protein kinase domain 72 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi23g00239 174 Gene3D Phosphorylase Kinase; domain 1 42 149 - -
Sebi23g00239 174 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 14 174 - -
Sebi23g00239 174 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Sebi23g00239 174 ProSiteProfiles Protein kinase domain profile. 70 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi23g00239 174 SUPERFAMILY Protein kinase-like (PK-like) 53 174 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00239 Sebi-Chr23 3156452 3159147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00239 1 174 MAP Kinase Kinase Gene Family AT4G29810 60.656 1.16e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Sebi23g00239 Pkinase 1.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00239 K20603 - gmx:100789734 284.648