Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00236 ATGTTTGCTTTGGATGTTCTATGTTTGTCTTTGCAGTCTGCACCAGTGAACATCAATGTAGGTTCTCATGTTTGGGTTGAAGATAAAGTGCAAGCATGGATTGGTGGCGAAGTTTCTAAAATCAATGGTGAAGAAATCCATGTTTGCACCACAAATGGGAAAACAGTTGTCATAAATATCTCAAAAGTTTTTCCCAAAGACGATGAAGCTCCCCCTGGAGGTGTAGATGACATGACAAAACTGTCATACTTGCATGAACCTGGAGTTCTGCACAACTTGGAAGCTAGATATGAACTCAATGAAATCTATACCTATACTGGCAATATCCTGATTGCGATAAACCCATTTCAAAGGTTACCACATCTATATGATACTCACATGATGGAACAATATAAAGGGGCTGCATTTGGAGAGTTGAGTCCCCATGTTTTTGCGGTTGCAGATGTTGCATACAGGGCAATGATCAATGAGGGGAAAAGCAACTCAATCCTGGTTAGTGGTGAGAGTGGGGCTGGAAAGACAGAGACAACAAAAATGCTTATGCGTTATCTTGCTTACCTTGGGGGCCGATCTGGAGTAGAAGGGCGAACTGTCGAACAACAAGTGCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGAAACAATAACTCAAGTCGTTTTGGTAAATTTGTGGAGATCCAATTTGACAACAAGGGAAGGATCTCTGGGGCAGCTATACGAACTTACTTGCTTGAAAGGAAAAAGAGAAGTATAAGCTGGGATGGTCCCAGTTCCTTCCATTACTTAAATCAATCCAACTGCTATGAACTGGATGGAGTTGATGATGCAAATGAATATATTGCAACCCGAAGGGCAATGGATGTTGTTGGAATCAGTGAGGAAGAACAGGAGGCAATTTTTAGGGTTGTTGCAGCAATTCTGCACCTTGGAAATATTGAATTTTCAAAAGGAGAGGAGATTGATTCTTCTGTCATCAAGGATGAGAAGTCTAGGTTCCATCTTAATATGACTGCTGAACTTCTTAAGTGTGATGCTAAGAGCTTGGAAGATGCACTGATCAAGCGTGTGATGGTAACACCTGAGGAGATTATTACAAGAACCCTTGATCCTGTTGCAGCTGTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCACGTTTGTTTGATTGGCTTGTGGAGAAGATTAACATTTCAATTGGGCAAGATCCAAATTCAAAATCTATTATTGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTGAACAGTTCTGTATTAATTTACAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTATTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATAAATTGGAGTTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGGTGACATATCAGGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTCGCAGAACAGCAGCATCTGCTGATAGCCTCCAAAATGCTCATTTGTGGCAGGTCTATTCCCCCCTTCTCCCGAGGAGTCTTCAAAGTCATCCAAGTTCTCTTCGATTGGATCTCGTTTTAA 1611 0.3985 MFALDVLCLSLQSAPVNINVGSHVWVEDKVQAWIGGEVSKINGEEIHVCTTNGKTVVINISKVFPKDDEAPPGGVDDMTKLSYLHEPGVLHNLEARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERKKRSISWDGPSSFHYLNQSNCYELDGVDDANEYIATRRAMDVVGISEEEQEAIFRVVAAILHLGNIEFSKGEEIDSSVIKDEKSRFHLNMTAELLKCDAKSLEDALIKRVMVTPEEIITRTLDPVAAVGSRDALAKTIYSRLFDWLVEKINISIGQDPNSKSIIGVLDIYGFESFKLNSSVLIYNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKVTYQADMFLDKNKDYVVAEQQHLLIASKMLICGRSIPPFSRGVFKVIQVLFDWISF 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00236 536 Gene3D - 425 479 - -
Sebi23g00236 536 Gene3D Kinesin motor domain 74 253 IPR036961 -
Sebi23g00236 536 Gene3D - 22 66 IPR008989 GO:0003774|GO:0005524|GO:0051015
Sebi23g00236 536 Pfam Myosin N-terminal SH3-like domain 21 62 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 SMART MYSc_2a 67 532 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 513 IPR027417 -
Sebi23g00236 536 PRINTS Myosin heavy chain signature 103 122 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 PRINTS Myosin heavy chain signature 160 185 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 PRINTS Myosin heavy chain signature 207 234 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 PRINTS Myosin heavy chain signature 415 443 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 PRINTS Myosin heavy chain signature 464 492 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 Gene3D - 256 296 - -
Sebi23g00236 536 Gene3D Myosin VI head, motor domain, U50 subdomain 298 408 - -
Sebi23g00236 536 Gene3D Kinesin motor domain 409 424 IPR036961 -
Sebi23g00236 536 FunFam Myosin 2 298 413 - -
Sebi23g00236 536 ProSiteProfiles Myosin motor domain profile. 73 536 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 19 68 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 PANTHER MYOSIN 69 480 - -
Sebi23g00236 536 Pfam Myosin head (motor domain) 254 480 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi23g00236 536 Pfam Myosin head (motor domain) 75 253 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00236 Sebi-Chr23 3110971 3115407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00236 13 507 Myosins gene family AT1G17580 68.739 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00236 K10357 - gmx:100777802 837.025