Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00235 ATGGAAACCTTAAATTCAACAGAACCTCACTATATCAGATGCGTGAAGCCGAACAATGTCCTCAAGCCTGCTATTTTTGAAAATCTCAATATTATCCAACAATTACGCTGTGGTGTGAGTATATCGGGGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCACCAGACTGACCTTTATGAGTTCCTTAACCGATATTTGGGTGTTCTGGCCCCGAACTATGATGACAAGATAGGCAAGACAAAGGCTTTCCTGAGGGCTGGTCAGTGGCTGAGTTGGATGCAAGAAGAGCAGAGGTTCTTGGAAAGGCAGCCAGAGTCATCCAGAGACAAATACGCACTCATATTGCACGCAAGGAATTCGTTGAATTGCGTCAATGCTGCAATTGTTTTGCAATCTGATTTACGAGGCATATTGGCTCGAAAGCTCTATGAGCAGTTGCAACGTGAAGCAGCAGCTGTGAAAATAGAAAAGAACTTCAAAGGATACATTGCCAGGAAATCTTACTTAACAGTGCGATTATCAGCCATCACATTACAGACAGGTTTAAGGGCTATGAAGGCCGCGATGAATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTTTTATCCAGGCTCATTTACGGAGACACTTTACATATTCTTATTATAAGCGATTGCAGAAGGCAGCAATTGTTTCTCAGTGTGTATAGTGTACTTAATATTGCTTTACAAGAAGCTACTGCAGGGAGTAACAGTTTGTATAACTTCATTCAGGCTGCCAGAGAAACAGGGGCCCTTAAAGAAGCAAAAGACAAGCTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATAGAAAAGCGTTTGAGAACTGATTTGGAAGAGGGAAAAGCACAAGAAATTGAGGAAGCAAATGCCAAGGTCATCAAAGAGCGAGAGGCAGCTCAGAAAGCCATTGAAGAAACACCTCCAATCATTAAGGAGACTCCTGTTATAATTCAAGACACTGAAAAGATTAATTCCTTGATGGATGAAGTCAATAGTTTAAAGGACAAAATTTCCAATGCAGAATCAGAAAATCAAGTTCTTCGTCAGCAAGCCCTGGCTGTATCTCCAACTGGAAAAGCTCTATCTGCAAGACCTAAGACAGTGATTATTCAAAGGACACCAGAAAGTGGGAATGCTCTAAATGGTGGAGCAAAAACTGCATCAGATATGAGTCTTGCTGTATCAAATGTGCGTGAGCCTGAATCAGGGAGGGAAAACCACAAAAATATCTCAATGAGAAGCAGCAAGGGAACCAGGACTTGCTTATCAAATGCATATCACAAGATTTGGGATATTCTGGGCAAACCTGTTGCTGCTGTGTTATATATAAATGCCTTCTTCACTGGAGATCATTTGAAGTCGAAAGAACAAGTGTTTTTGACAGTATCATTCAAACAATTACTTCAATCGTTGAGTAATGGGGAGTATGTAAAGACGGGTTTGGGTGAGTTAGAACAGTGGTGCACTGAGGCAACAGAGGAGGTGAGCATCAATCATCCATTTGGAACCTTTTACTTTTCCATGTGTATGTCTTCACCTGATTCTGTCATGTACAGTATGCTGGCTCAGCTTGGGAGGAACTGA 1623 0.4147 METLNSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGVSISGVFLRQLESAVLDIHQTDLYEFLNRYLGVLAPNYDDKIGKTKAFLRAGQWLSWMQEEQRFLERQPESSRDKYALILHARNSLNCVNAAIVLQSDLRGILARKLYEQLQREAAAVKIEKNFKGYIARKSYLTVRLSAITLQTGLRAMKAAMNLDLESKQRLQFLSRLIYGDTLHILIISDCRRQQLFLSVYSVLNIALQEATAGSNSLYNFIQAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEGKAQEIEEANAKVIKEREAAQKAIEETPPIIKETPVIIQDTEKINSLMDEVNSLKDKISNAESENQVLRQQALAVSPTGKALSARPKTVIIQRTPESGNALNGGAKTASDMSLAVSNVREPESGRENHKNISMRSSKGTRTCLSNAYHKIWDILGKPVAAVLYINAFFTGDHLKSKEQVFLTVSFKQLLQSLSNGEYVKTGLGELEQWCTEATEEVSINHPFGTFYFSMCMSSPDSVMYSMLAQLGRN 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00235 540 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Sebi23g00235 540 Coils Coil 329 363 - -
Sebi23g00235 540 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515
Sebi23g00235 540 Coils Coil 295 318 - -
Sebi23g00235 540 ProSiteProfiles IQ motif profile. 151 180 IPR000048 GO:0005515
Sebi23g00235 540 PANTHER MYOSIN 1 407 - -
Sebi23g00235 540 Coils Coil 259 286 - -
Sebi23g00235 540 SMART iq_5 150 172 IPR000048 GO:0005515
Sebi23g00235 540 SMART iq_5 125 147 IPR000048 GO:0005515
Sebi23g00235 540 Gene3D Kinesin motor domain 8 38 IPR036961 -
Sebi23g00235 540 Gene3D - 126 171 - -
Sebi23g00235 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 182 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00235 Sebi-Chr23 3102628 3108928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00235 470 509 Myosins gene family AT5G20490 55.000 5.81e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00235 K10357 - gmx:100777802 433.335