Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00207 ATGACCATCATGAAAATCATATGGAAATCAATCTTCCCTGGTTGTTACAAGGGTGAATATCCCTCACCTAAGCCCAAGAAAGTGGTGGCTACAAAGCCAAATTCTTCTCACAGGATTTCTGTAACAGATTTGAGTTATCCCAGCACCACATTTTCAGAGGATCTTTCCATTTCTCTAGCAGGATCTAACCTGCATGTTTTTACAGTTGCTGAACTCAAGGTTATTACACAACACTTCTCTTCAAGTAATTTTCTAGGAGAAGGTGGTTTTGGACCAGTGCATAAGGGGTTCATTGATGACAAGCTTAGGCCTGGTTTAAAGGCTCAGCCTGTGGCTGTTAAGCTCTTGGACTTGGATGGCACTCAAGGCCACAAAGAGTGGTTGACTGAAGTTGTTTTTCTGGGACAACTTAGGCATCCACACCTTGTGAAGCTAATAGGATACTGCTGTGAAGATGAACACAGGCTTCTGGTATATGAGTATTTACCAAGAGGCAGTTTAGAGAATCAATTATTTAGAAGGCAATTTTCTGAGATGGGAAGTAAAAAAGCAGCTGCATTGGCTTACCAATGTCTCAGCCATAGGCCAAAGAGTAGGCCTACAATGAGAGAAGTGGTTAAGATTCTAGAACCCTTACAAGATTTTGATGATATTCCAATGGGACCCTTTGTTTACACTGTTCCAGCTGATATTAATGAAGTGAATAAAGAAACAAGGGATTATGATTCACCTAAGGAGAGAAGAAGGGAAAATAATGGTCATCATCACAGGAATCACCATAACAGAAATGGTCATAGGCATCATCCACTTAAATCTCCAAAGTCACCAAAGCCACAATCACAGAATGATAGAGTTAGACACCAAAATGGCAGAGGAAGTGGGTCTAATTCTCCTCCATCACATCAGAAAGGCATAGCTTAA 921 0.4083 MTIMKIIWKSIFPGCYKGEYPSPKPKKVVATKPNSSHRISVTDLSYPSTTFSEDLSISLAGSNLHVFTVAELKVITQHFSSSNFLGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLDGTQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEDEHRLLVYEYLPRGSLENQLFRRQFSEMGSKKAAALAYQCLSHRPKSRPTMREVVKILEPLQDFDDIPMGPFVYTVPADINEVNKETRDYDSPKERRRENNGHHHRNHHNRNGHRHHPLKSPKSPKPQSQNDRVRHQNGRGSGSNSPPSHQKGIA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00207 306 MobiDBLite consensus disorder prediction 235 306 - -
Sebi23g00207 306 PANTHER OS01G0588500 PROTEIN-RELATED 175 213 - -
Sebi23g00207 306 ProSiteProfiles Protein kinase domain profile. 79 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi23g00207 306 MobiDBLite consensus disorder prediction 274 306 - -
Sebi23g00207 306 Pfam Protein tyrosine and serine/threonine kinase 83 190 IPR001245 GO:0004672|GO:0006468
Sebi23g00207 306 FunFam Serine/threonine-protein kinase BIK1 46 161 - -
Sebi23g00207 306 MobiDBLite consensus disorder prediction 250 273 - -
Sebi23g00207 306 SUPERFAMILY Protein kinase-like (PK-like) 45 176 IPR011009 -
Sebi23g00207 306 MobiDBLite consensus disorder prediction 235 249 - -
Sebi23g00207 306 Gene3D Phosphorylase Kinase; domain 1 46 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00207 Sebi-Chr23 2707913 2709741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00207 65 172 Glycoside Hydrolase AT3G07070 48.148 3.35e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi23g00207 PK_Tyr_Ser-Thr 6.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00207 - - gmx:100797003 339.347