Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00192 ATGTCGAGCTCATCGGAATACTCGGAGTTTTCCGGCCAGAAACCGGCGAGGGCGCCGGAAAAGTCAACTTTCTCTCAGACTTGTAGTCTATTGAGTCAATATATCAAGGAGAAGGGTAGCTTCGGAGATCTTACCCTCGGGATCACTTGCAACACCGAACCAAGTGGGTCACCTGAGACTTCTTGTCAGTCTGCAACAACCATGAACTTGTTTCCTACCAAGGAAAACAACATCACACCAAAGAACCTGACAGCTATGGATTTGCTCTCTCCACAAGCTGCCTATCATCCCCATTTAGAAGAGATTCCAACCTTGATCAATTCCAATGCAATTAAGTCTGTGAGCAAGGGACCTAAAGCTGCACAGATGACAATCTTTTATGCTGGCCAAGTTATTGTGTTTGATGATTTTCCTGCTGATAAAGCGAATGAGATCATGTCCCTTGCCAGCAAGGGCACATCCCAAAGCCAGAACAACTCTGTTTTCACTTACACACAGAGCCAGCCTTCTTTTCCTCCCAATCTAGTCAGAACATCTGCTGATTCAAGGCCAAGTACTCCAATTATTCCTCCCAGTGTGAATATCATCCCTAGTACTGGCACCAACTCGATTCATGAACACACTCAAGTGTCATCCAGACCTATTGTTTGTGATCTGCCAATTGCTAGGAAAGCTTCACTTCATCGGTTCCTTGAGAAGAGAAAGGATAGAATTGCTTCCAAAGCGCCATATCAACTGACAAATCCCATGGAGCCTGCAAATAAGCCAGCTGAATCCATGCCATGGTTTGGGTTGGGTGCTAAATCACCTCAAGTCTGA 819 0.4554 MSSSSEYSEFSGQKPARAPEKSTFSQTCSLLSQYIKEKGSFGDLTLGITCNTEPSGSPETSCQSATTMNLFPTKENNITPKNLTAMDLLSPQAAYHPHLEEIPTLINSNAIKSVSKGPKAAQMTIFYAGQVIVFDDFPADKANEIMSLASKGTSQSQNNSVFTYTQSQPSFPPNLVRTSADSRPSTPIIPPSVNIIPSTGTNSIHEHTQVSSRPIVCDLPIARKASLHRFLEKRKDRIASKAPYQLTNPMEPANKPAESMPWFGLGAKSPQV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00192 272 MobiDBLite consensus disorder prediction 246 272 - -
Sebi23g00192 272 Pfam Jas motif 220 245 IPR018467 -
Sebi23g00192 272 ProSiteProfiles Tify domain profile. 116 151 IPR010399 -
Sebi23g00192 272 SMART tify_2 116 151 IPR010399 -
Sebi23g00192 272 MobiDBLite consensus disorder prediction 1 22 - -
Sebi23g00192 272 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 253 IPR040390 -
Sebi23g00192 272 Pfam tify domain 118 150 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00192 Sebi-Chr23 2488124 2490338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00192 1 268 Tify Gene Family AT1G19180 41.455 2.06e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi23g00192 tify 1.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00192 K13464 - gmx:100801449 397.127