Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi23g00182 | ATGCAGGCCCAACTCACACTTCTGCTCACTACTCTCTTCCTCTCCCTCTTGTTCACGTTCTCGTGCGCCGCCGAGGCCCAAGATCTGGTCCGTTCCTCATGCGTCCACGCCAGGTACCCAAGGTTGTGTCTTCGAACCTTGTCCAACTACGCTGGGCCTGCCAACAGCACGTTGGACGTGGCCCGGGCCGCGCTGAGGGTGAGCCTGGCGCATGCCCGTAGGGCCTCCAAGTACCTGCGGGCTTACAAAGGAGGCGCCAGTAGCAGCAGCTTGAGCAAGCGGCAACGGGCCGCACTGACTGACTGCGTGGAGCAGGTTTCGGACTCAGTGGAGGAGCTGCGGAAGAGCCTGGAGGAGCTGCAGCACCTTCGCCCAGAGACATTCCGGTGGCAGATGAGTAACGCCATGACGTGGGTCAGCGCCGCCCTCACCGACGGCGATACCTGCCTCGACGGCAATGTCAGGCCCGATGTGAAGCGCAGAGTCACCGACTTGGCAAGGGTCACCAGCAATGCTCTTTACATGATCAATCGTCTGGGCCAAGGTGGGACCGGGAAGCCCAAGCCTCGTTCTGGCCCGGGCTCAAATTCCAATAACTGA | 600 | 0.6133 | MQAQLTLLLTTLFLSLLFTFSCAAEAQDLVRSSCVHARYPRLCLRTLSNYAGPANSTLDVARAALRVSLAHARRASKYLRAYKGGASSSSLSKRQRAALTDCVEQVSDSVEELRKSLEELQHLRPETFRWQMSNAMTWVSAALTDGDTCLDGNVRPDVKRRVTDLARVTSNALYMINRLGQGGTGKPKPRSGPGSNSNN | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi23g00182 | 199 | Coils | Coil | 103 | 123 | - | - | |
Sebi23g00182 | 199 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 11 | 174 | - | - | |
Sebi23g00182 | 199 | SMART | PMEI_2 | 25 | 175 | IPR006501 | GO:0004857 | |
Sebi23g00182 | 199 | CDD | PMEI-like_3 | 32 | 179 | - | - | |
Sebi23g00182 | 199 | Pfam | Plant invertase/pectin methylesterase inhibitor | 28 | 174 | IPR006501 | GO:0004857 | |
Sebi23g00182 | 199 | MobiDBLite | consensus disorder prediction | 178 | 199 | - | - | |
Sebi23g00182 | 199 | FunFam | Pectinesterase inhibitor 3 | 25 | 180 | - | - | |
Sebi23g00182 | 199 | NCBIfam | pectinesterase inhibitor domain | 2 | 179 | IPR006501 | GO:0004857 | |
Sebi23g00182 | 199 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 24 | 180 | IPR035513 | - | |
Sebi23g00182 | 199 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 27 | 179 | IPR035513 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi23g00182 | Sebi-Chr23 | 2312917 | 2313516 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi23g00182 | 29 | 179 | Carbohydrate Esterase | AT3G14310 | 30.247 | 2.20e-17 | 77.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi23g00182 | - | - | gmx:100816686 | 268.47 |