Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00169 ATGGCTTCTGATTCCGTTCCTTCTCTCAACGTGGTGGGATATACCGCTTCTCCACCAAAACACCCACCATCTCTCTTACTTAACATTCTCCTAACCGTAACGGTCTTCGCCATCGCCGTCACCGTCTTCCTAGTTCTCTATTTCATCCTCCGTTACCGTTGCCGTTGCCTCCGCCGTCTCTCTCCATCACCTTCCGCAGTTTTCTCCTACGGCCATCGGATATCGCCGGAGATTACTAAGTCTTCCACCGTCGACTCCCTCCCGCTTTTCGCCTTCTCTTCCATCAGCCGCCGCTCCTCCTCCGCCGGCGCTGACTGCGCAGTTTGCTTGTCGAAGTTCGAGCAGCGCGACCTTCTCCGCCTCCTCCCTCTCTGCTGTCACGCCTTCCACGCTGAATGCATCGACACCTGGCTCCGATCGAACCACACCTGTCCGCTCTGCCGTTCCGCCGTCTTCGCTTCGGAATCGGACCTCACGAAGTCTTTCCGGTCGTCTTCCACTGCCGGAGGGAACAGCTTCCGGCTGGAGATAGGTAACGTCAGCAGCCGCCGCGGAGCCGCATCTGACAATGCCGCCGGAGAAACGGGCGGGAGGTCCTATTCCGTGGGCGCGTTTGAGTATTTTGTAGATGAGGAGGCTGAGGTTCCGTTTAGCCACGCTCACCGGGGAATCGTTTCCGGCGAAAAAGATGACTCACCCGCAGTAGAGTCCCAGGCGGATTCTCATCCAAGCTTGGCCGGCGAGGTTGGGCGTGAAAGCAGCTGGTTGAAAGATTATGCTGATCGGCTCTCTGCTAGGATGTCATTTCGAAGCTCTGGAAGGTTCTTCACTGGGAGTAGTCGGCGAAGCGACGTCGTTGGAGTAGGAGATTACGAAGTGGAAGCCAACCGTTTTGGGGAAGAAATCAGCGAAATGTTTAGTTGGCTCTCAGGGGTTTGA 939 0.5644 MASDSVPSLNVVGYTASPPKHPPSLLLNILLTVTVFAIAVTVFLVLYFILRYRCRCLRRLSPSPSAVFSYGHRISPEITKSSTVDSLPLFAFSSISRRSSSAGADCAVCLSKFEQRDLLRLLPLCCHAFHAECIDTWLRSNHTCPLCRSAVFASESDLTKSFRSSSTAGGNSFRLEIGNVSSRRGAASDNAAGETGGRSYSVGAFEYFVDEEAEVPFSHAHRGIVSGEKDDSPAVESQADSHPSLAGEVGRESSWLKDYADRLSARMSFRSSGRFFTGSSRRSDVVGVGDYEVEANRFGEEISEMFSWLSGV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00169 312 SMART ring_2 106 147 IPR001841 -
Sebi23g00169 312 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Sebi23g00169 312 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 26 218 - -
Sebi23g00169 312 FunFam E3 ubiquitin-protein ligase ATL6 71 154 - -
Sebi23g00169 312 SUPERFAMILY RING/U-box 83 154 - -
Sebi23g00169 312 CDD RING-H2_EL5-like 105 148 - -
Sebi23g00169 312 MobiDBLite consensus disorder prediction 226 248 - -
Sebi23g00169 312 Pfam Ring finger domain 105 148 IPR001841 -
Sebi23g00169 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 152 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00169 Sebi-Chr23 2124914 2125852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00169 82 175 C3H Transcription Factor Family AT4G28890 51.064 8.91e-23 95.9