Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00168 ATGGATGGATATCAGGGGAGAAAATATGGTCAGAAGGTGACTAGAGATAACCCTTCTCCAAGAGCTTACTTCAGGTGCTCCTATGCCCCAAGCTGCCCGGTGAAAAAGAAGGTAATTAAGGGTGGAGTTAGTAGCCAAGGACTTAGTGGACAGGGATGA 159 0.4717 MDGYQGRKYGQKVTRDNPSPRAYFRCSYAPSCPVKKKVIKGGVSSQGLSGQG 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00168 52 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 38 IPR044810 GO:0003700
Sebi23g00168 52 ProSiteProfiles WRKY domain profile. 1 38 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi23g00168 52 SUPERFAMILY WRKY DNA-binding domain 2 38 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi23g00168 52 SMART WRKY_cls 2 51 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi23g00168 52 Gene3D WRKY domain 1 46 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi23g00168 52 Pfam WRKY DNA -binding domain 2 40 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00168 Sebi-Chr23 2121807 2121965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00168 2 39 WRKY Transcription Factor Family AT4G31800 92.105 1.35e-21 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi23g00168 WRKY 2.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00168 - - lja:Lj0g3v0130569.1 78.5666