Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00166 ATGGCATTTCAGGATTTTGACCTCATATCAGAAAGGAGAAAAAATGAGAAAAGACAAAAGCTGAAGAAGAAGATTATCATTGGTCTAGTTTCAGCCATTCTCCTTGCATGTATAATAAGTGCTGCAGCATTTGTTGTTGTAGTTAATAGATCTGGTCCTGACACCACCAAAAACACCAAGCATAAGGCTCCCTCAGCACCTGCCAATAATGCTCAACCTCAACATGTGGATAAATTTTCCAGGCTTGTGAAAATGATATGTAGTTCTGCAGTATACAAGAGCAAATGTGAAAGCACCCTTACTGAGGCATTGAAGAAGGACCCTAAATTGGCACAACCAAAGAATCTTCTCATGGTTTCTATGATACTTGCTGAGGCTGAGGTTAACAAGGCCTTCAACAAAACCACTACCTTGAAGTTTGCTTCTGAGCAGGAGAAAGGAGCATATGAAGATTGCAAGCAGTTGTTTGAGGATGCTAAGGAAGAGTTGGGATTCTCTATAACTGAAGTTGGTTCAAATGATTTGACCAAGCTTTCCACAAAAGCTCCTGAAATTAATAACTGGCTCAGTGCAGTCATGTCTTACCAACAAACCTGCATTGATGGTTTTCCTGAAGGAAAGTTGAAGGAAGAATTTGAGAAGCTTTTCAAGGAATCCAGGGAACTTGTTAGCAATTCCCTTGCTGTTGTGTCACAGTTGGTGGGAACACTTGAGAAACCCACACCTAATGTCACTGTGGCAAAAGATGGCAGTGGAAACTTCAAAACCATCTCTGAAGCTTTGGCAGCTATCCCACAAAACTATGAAAGAAGGTATGTGGTTTATGTTAAAGAAGGAGTATATGATGAGACAGTGACAGTGACAAAGATAATGGTAAATCTAACCATGTATGGTGATGGATCACAAAAGAGCATCATCACTGGTAACAAAAATTTTGTGGATGGAGTCAGGACTTTCCAAACTGCAACATTTGTGGTACTTGGAGAAGGATTCTTGGGCAGAGAAATGGGATTCAGAAACACTGCTGGTGCTGAAAAGCACCAAGCAGTGGCAGCAAGAGTGCAAGCAGATCAAGCAGTGTTTGTCAATTGTGCATTTGAGGGCTACCAAGACACTCTATATGCCCAAACACATAGACAATTCTACCGTGACTGTGTCATTGCTGGCACAATTGACTTCATCTTTGGTGATGCAGCTGCTGTGTTCCAAAACTGCACCATGGTTTTAAGAAAACCACTTGCCAACCAGCAGAACATTGTCACTGCTCAAGGGAGAATTGACAAGCAAGAAAACACTGGCTTTGTTCTCCAAAAATGTGTGATCAAGGCTGATGAGGCACTGGTTCCTGTGATCAAGAATTACCTTGGAAGGCCATGGAAGGAGTATTCAAGAACCATCATTATGGAATCAGAAATTGGGGGCTTAATTCACCCTGATGGGTGGCTACCTTGGGAAGGAGAGTTTGCACTCAATACACTGTATTATGCAGAGTACAACAACAATGGAGCTGGTGCCAACACCAATGCAAGGGTCAAATGGCCTGGACGCAAGGACATTAATAGGGATGAGGCTAGCAAGTATACCGTGGAGCCTTTCTTGCAAGGGACATGGATCAATGGCACAGGAGTACCAGCTCAGCTGGGCTTGTATAGTTGA 1656 0.4263 MAFQDFDLISERRKNEKRQKLKKKIIIGLVSAILLACIISAAAFVVVVNRSGPDTTKNTKHKAPSAPANNAQPQHVDKFSRLVKMICSSAVYKSKCESTLTEALKKDPKLAQPKNLLMVSMILAEAEVNKAFNKTTTLKFASEQEKGAYEDCKQLFEDAKEELGFSITEVGSNDLTKLSTKAPEINNWLSAVMSYQQTCIDGFPEGKLKEEFEKLFKESRELVSNSLAVVSQLVGTLEKPTPNVTVAKDGSGNFKTISEALAAIPQNYERRYVVYVKEGVYDETVTVTKIMVNLTMYGDGSQKSIITGNKNFVDGVRTFQTATFVVLGEGFLGREMGFRNTAGAEKHQAVAARVQADQAVFVNCAFEGYQDTLYAQTHRQFYRDCVIAGTIDFIFGDAAAVFQNCTMVLRKPLANQQNIVTAQGRIDKQENTGFVLQKCVIKADEALVPVIKNYLGRPWKEYSRTIIMESEIGGLIHPDGWLPWEGEFALNTLYYAEYNNNGAGANTNARVKWPGRKDINRDEASKYTVEPFLQGTWINGTGVPAQLGLYS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00166 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 235 IPR035513 -
Sebi23g00166 551 CDD PMEI-like_3 86 233 - -
Sebi23g00166 551 Gene3D - 241 551 IPR012334 -
Sebi23g00166 551 PANTHER PECTINESTERASE 38 539 - -
Sebi23g00166 551 Pfam Plant invertase/pectin methylesterase inhibitor 82 228 IPR006501 GO:0004857
Sebi23g00166 551 MobiDBLite consensus disorder prediction 54 73 - -
Sebi23g00166 551 FunFam Pectinesterase 237 549 - -
Sebi23g00166 551 NCBIfam pectinesterase inhibitor domain 76 233 IPR006501 GO:0004857
Sebi23g00166 551 SMART PMEI_2 78 229 IPR006501 GO:0004857
Sebi23g00166 551 FunFam Pectinesterase 79 234 - -
Sebi23g00166 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 81 233 IPR035513 -
Sebi23g00166 551 SUPERFAMILY Pectin lyase-like 240 544 IPR011050 -
Sebi23g00166 551 Pfam Pectinesterase 243 535 IPR000070 GO:0030599|GO:0042545
Sebi23g00166 551 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00166 Sebi-Chr23 2097876 2100560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00166 1 550 Carbohydrate Esterase AT2G26450 48.039 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00166 - - gmx:100784679 670.233