Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00161 ATGCCTGCATCTGGACTGAATGCACTGATTCCTAATGCAAATCAGCTTACCATATTCTACAATGGAAGTGTTTGTATCTATGATGGAATTCCTGCAGAAAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCCAAGTCTACTGAAATGAAGAAGATTGGGATGCAATCTCCTCTCCTTTCTCCTGTTCCCACAAGGCCTTCTTCTCCACATGGAACCACTAATAATGTTGCTTCAACACAGGCACTCTGCTTTCCAGCAAAGAAGAGTTCCATCTGCAGGCTGCAAGGTGAATTTCCAATAGCACGCAGACATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGACAGGCTGGGGAGCAAAGCCCCTTATCCTTCCTCACCAACAACAAAAGTGGCTGACAACATAGACAACAACTTCTGTGCTGACAATGCACCAGATTTGGTTTCCATGAAACGATCAGAGGAGGAATTTCAGCCAACAGTCTCTGCCTCTTGA 501 0.4511 MPASGLNALIPNANQLTIFYNGSVCIYDGIPAEKVHEIMLIAAAAAKSTEMKKIGMQSPLLSPVPTRPSSPHGTTNNVASTQALCFPAKKSSICRLQGEFPIARRHSLQRFLEKRRDRLGSKAPYPSSPTTKVADNIDNNFCADNAPDLVSMKRSEEEFQPTVSAS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00161 166 ProSiteProfiles Tify domain profile. 9 44 IPR010399 -
Sebi23g00161 166 MobiDBLite consensus disorder prediction 124 138 - -
Sebi23g00161 166 Pfam tify domain 11 43 IPR010399 -
Sebi23g00161 166 Pfam Jas motif 101 125 IPR018467 -
Sebi23g00161 166 MobiDBLite consensus disorder prediction 119 138 - -
Sebi23g00161 166 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 133 IPR040390 -
Sebi23g00161 166 SMART tify_2 9 44 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00161 Sebi-Chr23 2054269 2055172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00161 14 128 Tify Gene Family AT5G20900 55.652 3.51e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi23g00161 tify 1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00161 K13464 - gmx:100306045 278.87