Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00152 ATGGGTGATGGGTGTCAATGGAGAAAGTATGGACAGAAGACAGCAAAGGGCAACCCTTGTCCCAGGGCCTACTATCGTTGCAGCATGGGAACTGCTTGTCCAGTTCGTAAGCAGGTGCAAAGGTGTTTTAAGGATGAGACTGTTCTCATCACAACCTATGAAGGGAACCATAATCATCCACTCCCACCAGCAGCTAGACCAATGGCAAACTCAACATCAGCTGCATTGAACATGTTCCTTTCTGGCTCAACCACAAGTTTACATGGCACCACTCTTTCAAACACACGCCTCTTCTCTTCATTATCTACCCCTGCTTCCACTGCTTTAGCTACTTTCTCCCCATCTGCAATATGTCCCACAGTAACACTGGACTTTACTCAACCCACTAATACCTATTTGCAATTCCAAAAGGCCACTTCACAATCCTTATTCCCTTTGCCAATGCAAGGTTACCCTCAAACATCTGAGGGGTTGCACTTGAGTTCTAACCTTCCAACCATGACAACCCCAGAGAAAAATAACCTTGCCTTGGTGGATGTTGTGAGTGAAGCTATATCCAAAGACCCTTCTCTCAAGGCAGCACTTTATGCAGCCATTTCCTCAGTCACTACTAAAGATCCTCAGGACATGATCAATAACCATAACCAACATGGTAAGGGTGGTTATGACCCTTGTTCTAAGATGCCTGCAATATTACCACCTCATCATTCCTACACCACTCAATTGATTTAG 732 0.4508 MGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGNHNHPLPPAARPMANSTSAALNMFLSGSTTSLHGTTLSNTRLFSSLSTPASTALATFSPSAICPTVTLDFTQPTNTYLQFQKATSQSLFPLPMQGYPQTSEGLHLSSNLPTMTTPEKNNLALVDVVSEAISKDPSLKAALYAAISSVTTKDPQDMINNHNQHGKGGYDPCSKMPAILPPHHSYTTQLI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00152 243 SUPERFAMILY WRKY DNA-binding domain 2 62 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi23g00152 243 ProSiteProfiles WRKY domain profile. 1 62 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi23g00152 243 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 215 IPR044810 GO:0003700
Sebi23g00152 243 SMART WRKY_cls 1 61 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi23g00152 243 Pfam WRKY DNA -binding domain 3 60 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi23g00152 243 Gene3D WRKY domain 1 63 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00152 Sebi-Chr23 1984754 1986002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00152 1 202 WRKY Transcription Factor Family AT4G04450 49.315 1.81e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi23g00152 WRKY 4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00152 - - gmx:100816719 328.946