Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00149 ATGGTGCTTGTGAACCTTGGGAGGAAGAAAGAGGGACAGGGAATGCGACTTGGGAAATACGAATTGGGTAGGACTCTTGGTGAAGGCAATTTTGGAAAAGTCAAGTTGGCAAGGGACACAGATTCAGGACAGCTTTTTGCTGTTAAGATCCTTGAAAAGACCAAAATCATTGAGCTCAATAACGCTGATCAGATAAAGAGGGAAATATCCACCTTGAAGCTCCTGAAGCATTCCAACGTCGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAGAATTTATATGGTACTTGAGTACGTGAATGGTGGAGAGTTATTTGACAAAATTGCATCCAAAGGTAAACTTAGTGAAGCTGATGGTAGGAAGATGTTCCAACAATTGATTAATGGTGTGAGCTACTGCCACAATAAGGGTGTCTTCCACAGGGATCTTAAGCTAGAGAATGTGCTTGTGGATGCCAAAGGGAACATAAAGATAACGGATTTTAACCTCAGTGCCTTGCCCCAACATTTTAGGGCAGATGGGTTGCTGCATACAACTTGTGGAAGTCCCAACTATGTTGCCCCTGAGATTCTTGCCAATAGAGGCTATGATGGTGCAACATCAGATATATGGTCATGTGGTGTTATCTTGTATGTTATCCTAACAGGATACCTTCCTTTTGATGACAGAAATCTTGCAGTTCTCTATCAAAAGATTTTCAAAGGAGATGTTCAGATACCAAGATGGTTGTCACCTGGTGCCCAAAACATTATAAAGAGGATTCTTGATCCAAATCCTAAAACCCGGATGACAATGAACATGATCAAAGAAGATGAATGGTTCAGGGAGGGCTATACTCCTGCAATTCCAGATGATGAAGAGGGTGTACACATTGATGATGAAGCCTTTTCCATCCAAGAAGTGCTACCAGAAGCAGAACAGGGTAGTCCAGGATCACCAACACTTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCTTAGATCTCTCTGGCTTTTTTGAAAAAGAGGATGTATCTGAGAGGAAGATAAGATTTACATCCAACCATTCACCAAAAGATTTGGCAGAGAAGATTGAGGACATTGTAACAGAAATGGGATATAGAGTCCAGAAGAAAAATGGAAAGTTGAAAGTGATTCAAGAGAACAGAGCGCAGAAAAGTCTAGGTAGCCTCTCAGTGGCAGCAGAGGTGTTTGAGATAGGCCCATCTTTGTATGTAGTAGAACTAAGGAAGTCTTATGGAGATGCTTCTATATATAGACAGTTATGCAAGAAGTTATCAAATGACTTGGGTGTCCCGGGTTCACCCAAGGCACAGCTAGTGGCTCAGCAGTGA 1341 0.4183 MVLVNLGRKKEGQGMRLGKYELGRTLGEGNFGKVKLARDTDSGQLFAVKILEKTKIIELNNADQIKREISTLKLLKHSNVVRLYEVLASKTRIYMVLEYVNGGELFDKIASKGKLSEADGRKMFQQLINGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHFRADGLLHTTCGSPNYVAPEILANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPRWLSPGAQNIIKRILDPNPKTRMTMNMIKEDEWFREGYTPAIPDDEEGVHIDDEAFSIQEVLPEAEQGSPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSPKDLAEKIEDIVTEMGYRVQKKNGKLKVIQENRAQKSLGSLSVAAEVFEIGPSLYVVELRKSYGDASIYRQLCKKLSNDLGVPGSPKAQLVAQQ 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00149 446 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Sebi23g00149 446 FunFam Non-specific serine/threonine protein kinase 13 314 - -
Sebi23g00149 446 Gene3D Kinase associated domain 1, KA1 313 434 - -
Sebi23g00149 446 CDD CIPK_C 318 429 - -
Sebi23g00149 446 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Sebi23g00149 446 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi23g00149 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 419 - -
Sebi23g00149 446 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi23g00149 446 Pfam NAF domain 314 373 IPR004041 GO:0007165
Sebi23g00149 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Sebi23g00149 446 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Sebi23g00149 446 Gene3D Transferase(Phosphotransferase) domain 1 11 312 - -
Sebi23g00149 446 FunFam Non-specific serine/threonine protein kinase 314 435 - -
Sebi23g00149 446 SUPERFAMILY Protein kinase-like (PK-like) 17 288 IPR011009 -
Sebi23g00149 446 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00149 Sebi-Chr23 1932684 1937709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00149 83 444 CBL-interacting serine-threonine protein kinases AT3G17510 73.077 0.0 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi23g00149 Pkinase 9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00149 K07198 - gmx:100815660 736.487