Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00126 ATGGCCATAGGCAATGAAGAAAAGGTGGACCAGGCAGGTTCTCTGGATTTGAATCTTGATGTTACATCTGGTGAAAATGAAAATTGTGTTGCTGATAACCATCATATTAAGGGTGTTCCAGTTGGAAAAAAAGAATGCTATTCAGAGGCCAGAAAGGAACAAGACAACGTGGATTTTTCATCATGTTCAAGGGATGTTTGCAATTCTTGTACATTTGGTGGTGGAAAATATGAGGTGGATCTGCAAATGGATTCAGATTCAAGAAAGCAACTCAACTTTTTATTTAAAGAGGAAGTCATAGACACCACAAATACAAGATTCAAGAGTCGAGTTAAGTTCTTTAGCATTCTTGATCCAACAAGAATCTGTAGCTATATTTCTGAAGTCGTTGATGCTGGATTTCTTGGACCTCTTTTCAAGGTTACCATGGAAGATTGTCCAAGTGAGGCTTTTACAGATACCTCAGCAGAGAAGTGTTGGGAATCAGTTCTAAAGAGACTAAATCATGAAATCATGAGGCGGGGGAGTCTAGGTGAACTAGAACTTCCTCCGTTAGAGTTTCTGAAAAGCATTAACGGTCTTAGAATGTTTGGCTTTCTTTTACCATCCATTATTCAGGCCATCGAAGCTCAAGATCCCAGTCATCAGTGTGTAGAGTACTGGAATCACAAAGTTGTCCCTACATCTTCAGGCAGTGTCATTAGTGACTTTAAGGTCACTAATGGTTCAAGTAGCTCTTTAGATAATGTCGACACCAAAGGTTTTGATAACAATTTGATTGAGCAGGCAAAGGATAACATAGGAGGAAGCTGTCGTTCCCTCGAAGAGATGAAACCAATACTAGAAAGGGCAAGTTCGGATGAGTTAAGCACAATGCTTAAGTTACTCAGCTCTGATGCACAGTGCTCTCAGTGGAGAATGGCATTGCTATCTCTGATGGATGAGACCCAGAAAGCTTGTAGATAA 966 0.4017 MAIGNEEKVDQAGSLDLNLDVTSGENENCVADNHHIKGVPVGKKECYSEARKEQDNVDFSSCSRDVCNSCTFGGGKYEVDLQMDSDSRKQLNFLFKEEVIDTTNTRFKSRVKFFSILDPTRICSYISEVVDAGFLGPLFKVTMEDCPSEAFTDTSAEKCWESVLKRLNHEIMRRGSLGELELPPLEFLKSINGLRMFGFLLPSIIQAIEAQDPSHQCVEYWNHKVVPTSSGSVISDFKVTNGSSSSLDNVDTKGFDNNLIEQAKDNIGGSCRSLEEMKPILERASSDELSTMLKLLSSDAQCSQWRMALLSLMDETQKACR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00126 321 Pfam F/Y rich C-terminus 136 223 IPR003889 GO:0005634
Sebi23g00126 321 ProSiteProfiles FYR domain FYRC motif profile. 134 224 IPR003889 GO:0005634
Sebi23g00126 321 PANTHER TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 107 310 IPR040092 -
Sebi23g00126 321 SMART fyrc_3 138 230 IPR003889 GO:0005634
Sebi23g00126 321 Gene3D - 101 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00126 Sebi-Chr23 1683715 1686411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00126 107 317 JUMONJI Transcription Factor Family AT4G20400 39.336 6.95e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00126 K11446 - gmx:100781830 392.119