LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi23g00112	ATGGCAGGTTCTAATAGATCATCTTCTCTGAAAGATACTCAACGATCAATTCCTGTTGGAACTCTAGCTGCAACTCTTGTAACTTCTTTTATGTATCTTATTTCTGTGATAATGTTTGGTGCTGTTGCCACCCGAGACAAGCTTTTAACTGACAGGCTACTTACAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGGATTATTCTTTCAACTATGGGTGCTGCTCTTCAGAGCCTGACTGGTGCTCCACGCCTGCTTGCAGCAATAGCCAATGATGATATTTTACCTATTTTGAACTACTTTAAAGTTGCAGATGGCAATGAGCCACATGTTGCTACCCTTTTTACTGCTTTCCTATGTATTGGGTGTGTGATTATTGGGAATCTGGATCTTATCACTCCAACTGTGACTATGTTTTTCCTTCTCTGTTATGCTGGGGTCAACTTATCGTGCTTCCTTCTCGATCTTCTAGATGCCCCTAGTTGGCGTCCTCGGTGGAAATTTCACCATTGGAGTCTATCGCTGGTAGGAGCATTACTTTGCATAGTGATCATGTTCCTAATCTCTTGGTCATTCACTGTGGTGGCTTTGGCCCTTGCAAGCCTTATATATAAGTACGTGAGCATAAAAGGAAAGGCTGGGGACTGGGGAGACGGTTTCAAAAGTGCCTATTTCCAACTAGCACTTCGTAGCCTTCGGTCATTAGGAGCAAGTCAAGTGCACCCAAAGAATTGGTATCCAATTCCCTTAGTATTTTGCCGACCCTGGGGCAGACTGCCAGAAAATGTTCCCTGTCATCCCAAACTTGCAGACTTCGCTAATTGTATGAAGAAGAAAGGTCGAGGAATGTCCATATTTGTCTCTATATTAGATGGGGATTACCATGAATGTGCTGAAGATGCCAAGGCTGCTTGTAAACAACTTAGTACCTACATTGATTACAAGAATTGTGAAGGTGTGGCTGAGATTGTTGTAGCCCCTAACATGTCTGAAGGCTTTCGTGGCATCGTTCAGACAATGGGCCTTGGCAATCTCAAACCGAACATTGTTGTGATGCGATACCCAGAAATCTGGCGTCGGGAGAACTTAACAGAAATTCCTGCCACCTTTGTTGGGATAATTAATGATTGCATTGTCGCTAACAAGGCAGTAGTTATAGTTAAGGGTCTTGATGAATGGCCAAATGAGTACCAGAAGCAGTATGGTACAATTGATTTGTATTGGATTGTAAGAGATGGCGGTCTCATGCTACTGCTCTCTCAATTGCTTCTTACAAAAGAGAGCTTTGAGAGTTGCAAGATTCAAGTTTTCTGTATTGCAGAAGAGGATGCAGATGCAGAGGGGCTGAAAGCTGATGTGAAAAAATTCCTTTATGATCTTCGGATGCAAGCAGAAGTCTTTGTCATAACAATGAAATGGGATGCACAAATGGATGGCGAGTCTCCGCAAGATGAGTCATTCGAAGCATTTACTAATGCTAAACAAAGAATTGTTGATTATTTAACTGAAATGAAGGCAACATCAGAGAGAGAAGGCACCCCTCTAATGGCAGATGGTAAGGCTGTAGTTGTGAACGAGAAGCAGGTTGAGAAATTTCTATACACTACCCTTAAGCTCAATTCAATAATTTTGAGATATTCAAGAATGGCTGCTGTTGTGTTAGTAAGTCTGCCTCCACCTCCATTAAACCACCCAGGTTATTTTTATATGGAGTACATGGATCTGTTGCTGGAAAATGTACCAAGGATTTTGATTGTAAGAGGATACCGTAGAGACGTTGTAACTCTATTCACATAG	1806	0.4192	MAGSNRSSSLKDTQRSIPVGTLAATLVTSFMYLISVIMFGAVATRDKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGNEPHVATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLVGALLCIVIMFLISWSFTVVALALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLVFCRPWGRLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKAACKQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDADAEGLKADVKKFLYDLRMQAEVFVITMKWDAQMDGESPQDESFEAFTNAKQRIVDYLTEMKATSEREGTPLMADGKAVVVNEKQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPLNHPGYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT	601

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi23g00112	601	Pfam	Solute carrier family 12	270	391	IPR018491	GO:0006811\|GO:0016020\|GO:0022857
	Sebi23g00112	601	Pfam	Solute carrier family 12	402	600	IPR018491	GO:0006811\|GO:0016020\|GO:0022857
	Sebi23g00112	601	Pfam	Amino acid permease	2	244	IPR004841	GO:0016020\|GO:0055085
	Sebi23g00112	601	PANTHER	SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS	1	598	IPR004842	GO:0006811\|GO:0015377\|GO:0016020
	Sebi23g00112	601	Gene3D	Amino acid/polyamine transporter I	1	218	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi23g00112	1	601	Inorganic Solute Cotransporters	AT1G30450	86.070	0.0	1054

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi23g00112	K14427		-	pvu:PHAVU_009G216800g	1101.66