Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00098 ATGGCTGTGCCTTTGCTGACCAAGAAGATCGTGAAGAAGAGGGTCAAGCAGTTCAAGCGCCCTCAGAGCGATCGTAAGATCTCCGTCAAGACAAACTGGCGCAGACCCAAGGGTATTGATTCCCGTGTGAGGAGGAAGTTCAAAGGATGCACTTTGATGCCCAACATTGGTTATGGTTCAGACAAGAAAACTCGCCATTACCTACCAAATGGTTTCAAGAAGTTTGTTGTTCACAATGTGGAAGACCTTGAACTTCTCATGATGCATAACAGGACATATTGTGCTGAGATTGCTCACAATGTATCCACAAGGAAGAGGAAGGAAATAGTTGAAAGAGCTGCCCAGCTTGATGTCGTTGTGACAAACAAAACAGCCAGACTCCGCAGCCAGGAGGATGAATAG 402 0.4627 MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVEDLELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKTARLRSQEDE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00098 133 CDD Ribosomal_L32_L32e 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sebi23g00098 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
Sebi23g00098 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sebi23g00098 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sebi23g00098 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00098 Sebi-Chr23 1261577 1263012 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00098 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 85.714 3.28e-85 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00098 K02912 - gmx:100787561 254.988