Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00083 ATGTCCCCAGCTGCAGGAGCCGTAGCTTTACACTCTTCCCTTTACACCATCTCTTCTGATAAACCATCATCTCCTTCAAAATCAAGCACCAATTTGGCTGCCAAACCAAAAAGCCTCCTCCAAAGCCATCCACTTTATACACCAACCCATGCTAAACTCTCCCTTCAATTCAAAGAGAAAATCTTGTGCCTTGAGGTAATGGGTATTGATGCAGGTAAAGCACTGACCCAAAACCCTGACCTCCGCACAGCTACCATGGAATCTATTCATTCCATTATTTCCTTCCTTCTGACCAAAGGCATCCAGCATAAGGACTTGCCTAGGATCTTTGGCATGTGCCCCAAGATTCTCACCTCTGACATCAAAACTGATCTTAACCCCGTTTTTGATTTTCTCTTGCATGACCTCAAAGTCCCTGATCATAACTTTAGGAAGGTTATCAATAAGTGCCCAAGATTGCTTACATCTAGTGTGATTGACCAGCTTAAGCCAGCTTTGTTTTACCTAAAGAGACTTGGGTTCAAGGATTTGGCACCCTTGGCTTATCAAGATTCTGTTCTGTTGGTGTCTAGTGTAGAGAGGACCCTTATCCCTAAGCTGAAGTATTTGGAGAATTTGGGATTTTCCAAGGATGAGGCTAGATGTATGGTGTTGAGATGTCCAGCATTGTTCACTTTCAGCATAGAAAATAATTTTCAGCCTAAGTTTGAGTATTTTTCTGTGGAAATGGGAGGAAAATTGAAGGAGCTGAAAGAATTTCCTCAGTACTTCGCTTTTAGTTTGGAGAACAGGATAAAGCCTAGACACATGGAGGTTGTGCAAAGTGGAATCAATTTGCCTTTGTCAGTGATGCTTAAAAGCACTGATGAAGAATTTAGGGAGCTGATAAAGAAAGGGGGTGGATGA 906 0.4227 MSPAAGAVALHSSLYTISSDKPSSPSKSSTNLAAKPKSLLQSHPLYTPTHAKLSLQFKEKILCLEVMGIDAGKALTQNPDLRTATMESIHSIISFLLTKGIQHKDLPRIFGMCPKILTSDIKTDLNPVFDFLLHDLKVPDHNFRKVINKCPRLLTSSVIDQLKPALFYLKRLGFKDLAPLAYQDSVLLVSSVERTLIPKLKYLENLGFSKDEARCMVLRCPALFTFSIENNFQPKFEYFSVEMGGKLKELKEFPQYFAFSLENRIKPRHMEVVQSGINLPLSVMLKSTDEEFRELIKKGGG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00083 301 Pfam mTERF 187 292 IPR003690 GO:0003690|GO:0006355
Sebi23g00083 301 Pfam mTERF 59 174 IPR003690 GO:0003690|GO:0006355
Sebi23g00083 301 FunFam Transcription termination factor MTEF1, chloroplastic 132 299 - -
Sebi23g00083 301 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Sebi23g00083 301 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Sebi23g00083 301 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Sebi23g00083 301 SMART mt_12 72 102 IPR003690 GO:0003690|GO:0006355
Sebi23g00083 301 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Sebi23g00083 301 SMART mt_12 214 246 IPR003690 GO:0003690|GO:0006355
Sebi23g00083 301 PANTHER CGI-12 PROTEIN-RELATED 27 295 IPR003690 GO:0003690|GO:0006355
Sebi23g00083 301 Gene3D Transcription termination factor 3, mitochondrial 120 298 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00083 Sebi-Chr23 1098070 1098975 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi23g00083 mTERF 7.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00083 K15031 - gmx:100788221 485.337