Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi23g00054 ATGGCGTTTGATCAAAACTCCAGCGCCAACGATATGCGGCCACAACTGACTGTGGCCCGAACTGTACCCGAAGAGCCACTCGTTTTGCCGGCGAGTACGACGGCGGTTAATGGAGCTTCCGGTGCGATGCCCCTTTTCTACCCTGCCTCTGTCTCTGATGCTGGCTTGGTAGGAATGGGGTATGGAAATGTGGCTTCGGGTGCTGCTCCTACCACCTGGTGCGTTCGCCCTGCTGTGCCCATTCGCCATCCCACTGTGAACCCTGCTGCTGCGTTTAGTCATGCTCCTAGTTTCCCCAATCGAGTTGTTGGTGGCAATGCTGTTGATCTTTCGGGTAGCTTTGTGGCTACTGCTCATGGTTATCCTCTGAATTTGGGCAACTGGGTTACGGGTAATGCCTTGGATAATGGTCTTCAGGGCAATAGCAGAGTCGTTAGCAATGCCAGTGATCATGCTGGTGGTGGTGCTTTGGGTGGAAATGGTGTCAATCCCCCTGCAAGCCAGCGGGCTGATCAGGCTAGTGAAGAGGGCGGGGGGGATGATTCAGTGTCTGGGCGGAAATTGAAGATTATGTGTAGTTATGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGAGGGCAGACGAGGATCATAAGTGTTAAGAGAGATGTGAGGTTTAATGATTTGGTGCAAAAGATGGTGAATATTTTTGGGCAACCTGTGGTTATCAAGTATCAGCTCCCTGATGAGGATCTTGATGCATTGGTTTCGGTTTCCTGCCCTGAAGATCTGGAGAATATGATGGAGGAGTATGAAAGGTTAATTGAGAGGTCTCCTGATGGTTCTCCTAAATTAAGGGTCTTTCTGTTTTCTGCTTCAGAACTTGATCCTTCTGGTATGGTACAGTTTGTAAATTTACAAGATGGTGGACAGAGATATGTTGAGGCTGTGAATGGAATTACTGATGGGGTTGGTGGTAAACTCACAAGGAAAGGGAGCATTACAAGTGCAGCTTCTACACAAAATTCTGATTTGAGTGGAGTAGAGGCTCTTGATAACTCAAATGCTGCCCAAGGGGATGTCAGTGGGGCACCTGTGTCCAGTGCTTTATCACCTGAGGGGAATGTCGCTGCTTCACATGATGCTACTGCAAATTTTGTGGTTTCTGAGCCTGTTGCATCAATTCACTCAGATGCTTCTGCGGTTTCATTAGGCATACCTGTGACTAATTCTGGTCCAACTCAAGCTCCACCTTTCCAGAATGAGGTTGAGTTAGAGAAGTCTGTGCCCATTACTTTGTCTCAGCAGCAATTTGGGTTGCAGCAGTCTGGAATGGAAATTCCACCACCTGCACCTCTTCAGGCTTTTGTTGATCCTCGACAAGAAGTTATGAACCATGCGGATTATGTCCAGCTGCCTCCCCATATGGGATTCCCGAATCCTCAGCTCTTAGGTAAGCCTGGGTCTATCTACTCCCAACATCAATTCCATGACAATTCTCCTCGTTTAGCGTCCCATCAGGTAATCCCTGCAGTGCAAATGACAATGACTCAGCCATCTTCTCATGCTGGTGTAAGACCGAGTGTTATTCAACCACAAACATTCATGCAACTCCAGCAAAACCATTTGAACCAATATAATGATGAAAATACTTCAGGGCTAAGGATTCACCAGCTTCCTCCTGAACAAAGTTACAATGCATATCCAGTTCAATTCCCTTATGGAGGTAATTATGGTTGGGTCCAGGTTTCTCCACCAGAGCATGTCATTTTTCCTGATGCACTATTACCTCAACAACCAGCAATGATCCCTGAGAAAGTCCAAAGAGTGGAGGACTGTTATATGTGTCAGAAAAAACTGCCTCATGCACATTCAGATCCAGTCGTGCAGGATCAGCAAAATAGCTGTGCAGGTCCAATTGCTGATTCAATCCCAAGTTACCATAGTCTCCCTATGGAGGACAATTTAAGACCTCAACCAATAAATAAGGTTTTGGTGACTGCACCAATGAAGGAAGGCAATGTTGAGCAAGCAGTTGGGACCAGGCCCAGGGTCATTAGCAAATTGGAACCTCCAGGTGTAGTACATTGTACTGACGCAACTGGACTTCCTCTGGAACCTGAAGGTGAGAGGATTTTTATAATGGACAGGTCTGATCATCCCAGAAATGCAGCAGTTATCCAGGAAACAATTGGAAGAACAGATGATATTATGCGCCAGCAAGTGGCTCCAGTTGAAAACCGTGCTAAAGAGGATGTGGTTGTGAATAAACCTGTTAATAATGATATACCTTTAGTTGGTGGTACATCTATTTCAACTTCTGAGTGTATGGTTCAAGAATCTCCAACAGAATATACTAACAAACTTGCTAGCACTATTTCAAAAGCAGATGCTGTGGAGAATTGGATTAAACAAGACCTTCTCAAACCTATTGATGGAAGGATGGACACCCTCAAGATGGGCAATCCTGAATTTTTTGTAAATAATGATAGATTTGATTACAGCACTCAGCATGCTGTAGAGAAGAAAGGGGTAGTCTTTGATAACAACCTTGGCAGGCCAGTGGAATATAATGAGGTTACTCAACTGCCTGTTTGGGGTATTCCTGGATCAAATCCTCAATCAAAGAATGGAAACCATCAGAAGGATGATGCAGTTTTATCTTCAATTTCACCATCTGTTAGGTTTGGAGATGTGCAGGATTCTTCAAACTCACTCTTTAGCAATCAGGATCCCTGGAATGTACACGCTACCTACTTTCCACCACCTAGACCTAACAAAATTGCATTGAAGAAAGAGTATTCTTATAAGGATCAGCTTTGTGAGAATCTTGGCAACAGTGGGGAACAAAATTTAGAACCTCAATTGGATGATGGCCTCTACCAGACATTCAAACAAAATTTGACTCTAGAAGAAGCTCAATCTGCCAAGGAAGAACGACAGCTTCAAGCTGTTGCTGAAGGTTTAGCTGCTTCTGTTCTGAATTCAAGCACTTCTTCAAATCCTAGAGATGTGTCCCATTGTGAAAACATTGACAATGGAGATGTTCAAAATAATCTAATAGATATACAGTGTAAAGATAAAACTCTGGATGTCAAAAGCAAGGTCCCAGAGAAGGCAAATTTTGGCTTTCCAGCATCAGATGTTGGATCGTTGCAGGTTATAAAAAATTGTGACCTTGAAGAGCTGATAGAATTGGGTTCTGGGACCTTTGGGACTGTATATCATGGAAAATGGAGGGGTACTGATGTTGCAATAAAGCGGATTAACGATAGGTGTTTTGCTGGAAAGCCTTCTGAACAAGAGCGCTTGAGAGCTGATTTTTGGAATGAGGCAGTCAAGCTTGCTGATTTGCACCATCCAAATGTGGTCGCTTTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACTGTAACAGAGTATATGGTTAATGGTTCTTTAAGGAATTCCTTGCAGAAGAATGGGAGGAATCTTGATAAGCGCAAGCGTCTCCTGATTGCAATGGATGTGGCGTTTGGTATGGAGTACCTGCATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTGAAATGCCAGACACTAATATCTGGTGGTGTGAGAGGAACTCTACCTTGGATGGCCCCAGAACTACTGAATGGGAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCATTTGGTATTGTCATGTGGGAACTCCTCACTGGAGAAGAGCCATACGCTGATTTGCACTATGGGGCCATCATAGGTGGTATTGTGAACAACACTTTACGGCCTCCAGTTCCAGAATCTTGTGATCCAGAATGGAGACTGCTGATGGAGAGGTGCTGGTCATCAGAACCATCAGAAAGACCAAGCTTCACTGAGATTGCCAATGAGTTACGTTCCATGGCAGCCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCTGCTTCCTCCCAGAGTCAAGTGCAGAAATAA 4050 0.4479 MAFDQNSSANDMRPQLTVARTVPEEPLVLPASTTAVNGASGAMPLFYPASVSDAGLVGMGYGNVASGAAPTTWCVRPAVPIRHPTVNPAAAFSHAPSFPNRVVGGNAVDLSGSFVATAHGYPLNLGNWVTGNALDNGLQGNSRVVSNASDHAGGGALGGNGVNPPASQRADQASEEGGGDDSVSGRKLKIMCSYGGKILPRPSDGMLRYVGGQTRIISVKRDVRFNDLVQKMVNIFGQPVVIKYQLPDEDLDALVSVSCPEDLENMMEEYERLIERSPDGSPKLRVFLFSASELDPSGMVQFVNLQDGGQRYVEAVNGITDGVGGKLTRKGSITSAASTQNSDLSGVEALDNSNAAQGDVSGAPVSSALSPEGNVAASHDATANFVVSEPVASIHSDASAVSLGIPVTNSGPTQAPPFQNEVELEKSVPITLSQQQFGLQQSGMEIPPPAPLQAFVDPRQEVMNHADYVQLPPHMGFPNPQLLGKPGSIYSQHQFHDNSPRLASHQVIPAVQMTMTQPSSHAGVRPSVIQPQTFMQLQQNHLNQYNDENTSGLRIHQLPPEQSYNAYPVQFPYGGNYGWVQVSPPEHVIFPDALLPQQPAMIPEKVQRVEDCYMCQKKLPHAHSDPVVQDQQNSCAGPIADSIPSYHSLPMEDNLRPQPINKVLVTAPMKEGNVEQAVGTRPRVISKLEPPGVVHCTDATGLPLEPEGERIFIMDRSDHPRNAAVIQETIGRTDDIMRQQVAPVENRAKEDVVVNKPVNNDIPLVGGTSISTSECMVQESPTEYTNKLASTISKADAVENWIKQDLLKPIDGRMDTLKMGNPEFFVNNDRFDYSTQHAVEKKGVVFDNNLGRPVEYNEVTQLPVWGIPGSNPQSKNGNHQKDDAVLSSISPSVRFGDVQDSSNSLFSNQDPWNVHATYFPPPRPNKIALKKEYSYKDQLCENLGNSGEQNLEPQLDDGLYQTFKQNLTLEEAQSAKEERQLQAVAEGLAASVLNSSTSSNPRDVSHCENIDNGDVQNNLIDIQCKDKTLDVKSKVPEKANFGFPASDVGSLQVIKNCDLEELIELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERLRADFWNEAVKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNSLQKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESCDPEWRLLMERCWSSEPSERPSFTEIANELRSMAAKISPKGQNQQQQPASSQSQVQK 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi23g00054 1349 CDD STKc_MAP3K-like 1065 1322 - -
Sebi23g00054 1349 Pfam PB1 domain 207 289 IPR000270 GO:0005515
Sebi23g00054 1349 MobiDBLite consensus disorder prediction 1329 1349 - -
Sebi23g00054 1349 MobiDBLite consensus disorder prediction 355 373 - -
Sebi23g00054 1349 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 207 291 - -
Sebi23g00054 1349 CDD PB1_UP2 191 289 - -
Sebi23g00054 1349 Gene3D Transferase(Phosphotransferase) domain 1 1147 1349 - -
Sebi23g00054 1349 PRINTS Tyrosine kinase catalytic domain signature 1249 1271 IPR001245 GO:0004672|GO:0006468
Sebi23g00054 1349 PRINTS Tyrosine kinase catalytic domain signature 1178 1196 IPR001245 GO:0004672|GO:0006468
Sebi23g00054 1349 PRINTS Tyrosine kinase catalytic domain signature 1293 1315 IPR001245 GO:0004672|GO:0006468
Sebi23g00054 1349 PRINTS Tyrosine kinase catalytic domain signature 1141 1154 IPR001245 GO:0004672|GO:0006468
Sebi23g00054 1349 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1147 1338 - -
Sebi23g00054 1349 SUPERFAMILY Protein kinase-like (PK-like) 1053 1321 IPR011009 -
Sebi23g00054 1349 MobiDBLite consensus disorder prediction 355 374 - -
Sebi23g00054 1349 ProSitePatterns Protein kinases ATP-binding region signature. 1065 1096 IPR017441 GO:0005524
Sebi23g00054 1349 Gene3D - 208 291 - -
Sebi23g00054 1349 SUPERFAMILY CAD & PB1 domains 203 293 - -
Sebi23g00054 1349 SMART serkin_6 1059 1330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi23g00054 1349 Pfam Protein tyrosine and serine/threonine kinase 1064 1322 IPR001245 GO:0004672|GO:0006468
Sebi23g00054 1349 ProSiteProfiles Protein kinase domain profile. 1059 1326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi23g00054 1349 Gene3D Phosphorylase Kinase; domain 1 1052 1146 - -
Sebi23g00054 1349 MobiDBLite consensus disorder prediction 1326 1349 - -
Sebi23g00054 1349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1184 1196 IPR008271 GO:0004672|GO:0006468
Sebi23g00054 1349 SMART PB1_new 202 291 IPR000270 GO:0005515
Sebi23g00054 1349 MobiDBLite consensus disorder prediction 145 184 - -
Sebi23g00054 1349 PANTHER SERINE-THREONINE PROTEIN KINASE 254 1324 - -
Sebi23g00054 1349 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1052 1146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi23g00054 Sebi-Chr23 720500 727427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi23g00054 92 662 MAP Kinase Kinase Kinase AT3G46920 38.210 5.27e-91 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Sebi23g00054 PK_Tyr_Ser-Thr 1.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi23g00054 - - gmx:100776264 2060.42