LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi23g00021	ATGGAAAGTTCCAAGAGCAACAGAGGGGAGAAAAGAGGGTATGAGCTAGTTAAGGAGGGTGATGATGCACAGCATCATCTGACTCAGTCAAAGAAGCCAAAACTACCCGGTTTAGCCAGTGTAATTGTGGAAGCTTTAAAGGTAGATAGTCTGCAGAGACTTTGCTCATCTTTGGAGCCTCTTCTGAGGAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAAATGGGCCATGCTAAACTGGGTGAAAGATCTCCCCCACCAAGAATTGAAGGACCAGGGGAAAAGAATCTGCAACTTCATTTCAGAACAAAAATGCCACCTCACTTGTTCACAGGGGGGAAGGTTGAGGGAGAGCAAGGAGCAGCTATCCATGTTGTTTTACTGGAGCCAAACACAGGCGATGTTGTTCAAGTTGGACCAGAATCAGTTGCTAAATTGAATGTTGTTGTACTTGAAGGTGACTTTAGTGAGGAAGCTGATGATGATTGGACAAAAGAACACTTTGAAAGCCATGAAGTAAAGGAACGTGAGGGGAAAAGACCACTTCTAACTGGAGATTTGCAAGTTAGCTTAAAAGAAGGGGTAGGAACCTTAGGTGATCTTACTTTCACTGACAATTCTAGCTGGATAAGAAGCAGAAAATTCAGGCTTGGTGTTAAGGTTGCTCCTGGTTATTGTGAGGGAATTCGTGTGCGCGAAGGAAAGACTGAAGCCTTTGCTGTCAAAGATCACAGAGGAGAATTATACAAGAAACACTATCCACCAGCTTTGCATGATGAAGTATGGAGATTGGATCGGATAGCCAAGGATGGGGCACTTCACAAAAAACTGATTCAAGCAAAAATATTGACTGTAGAAGATTTCCTGCGCCTTCTTGTCCGCGAACCACAGAAATTAAGAAGTATACTTGGCAGTGGAATGTCCAACAGGATGTGGGAGAACACTGTGGAGCATGCCAAGACATGTGTCTTGGGTGGTAAGCTGTTTGTTTTCTACACTGATGAATCTCATAACACTGGCATTGTGTTCAACAACATATATGAGCTGAGAGGCCTCATTGCTGATGGCCAGTTCTACTCTTTGGAATCACTTACTCCAAATCAGAAGATGTCTGTGGATTCCTTGGTGAAGAAAGCCTATGACAATTGGGACCAAGTTATAGAATATGATGGAAAAGTTTTGAATTCTCTTACAAATTCCAAAAAGGGTTCAAGATCTGTAGCCCCTCACATAATGAATCATAACAATATCCCAGAGCAGCAGTATGCTTCTGCAAAGAGCAGGGTGTCATATGTCTCCTCTGAACCAAATCAACATTTACAAATAACAAATAACTACTCATCTGCTCCTGATTTGACTGATTATCAATTTGGGAGATCTGATAATCAGATGGTAGGGACATCATCAATAAATAACTCTCAAATAGCATTGCCAGGAACCATGAACTACATGTCAGGTGAAAATCATGAAATAGAAGGTGCTTATTTTCCTGGAGATTGGTCTAGGCAGAGAAATGGACAAGGGCTGGAAGACATTGTTGCTGAAGAACTCCGGCTTAGGAGTTCACAGATGTTGGAGAGTGATGATATGCAGAGGTTACTAAAGACAATCAATGCAGGAGTTAGCATGTCTAATTTTGGTCATTCTAATGAGAGTTGTTATGCATACAGTCTTCAATATGAGCCTCAGGTGTATCATCCATTCAATGAGGATCATGGAAAGCCTTCAGGGAAGGCTGTTGTTGGGTGGCTTAAGCTCAAAGCTGCTTTAAGGTGGGGAATATTTATCAGGAAAAAAGCTGCAGAAAGGAGAGCACAACTTACTGAGTTAAATTGA	1842	0.4202	MESSKSNRGEKRGYELVKEGDDAQHHLTQSKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKMGHAKLGERSPPPRIEGPGEKNLQLHFRTKMPPHLFTGGKVEGEQGAAIHVVLLEPNTGDVVQVGPESVAKLNVVVLEGDFSEEADDDWTKEHFESHEVKEREGKRPLLTGDLQVSLKEGVGTLGDLTFTDNSSWIRSRKFRLGVKVAPGYCEGIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKILTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVFYTDESHNTGIVFNNIYELRGLIADGQFYSLESLTPNQKMSVDSLVKKAYDNWDQVIEYDGKVLNSLTNSKKGSRSVAPHIMNHNNIPEQQYASAKSRVSYVSSEPNQHLQITNNYSSAPDLTDYQFGRSDNQMVGTSSINNSQIALPGTMNYMSGENHEIEGAYFPGDWSRQRNGQGLEDIVAEELRLRSSQMLESDDMQRLLKTINAGVSMSNFGHSNESCYAYSLQYEPQVYHPFNEDHGKPSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN	613

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi23g00021	613	Pfam	Calmodulin binding protein C-terminal domain	329	391	IPR046829	-
	Sebi23g00021	613	MobiDBLite	consensus disorder prediction	1	32	-	-
	Sebi23g00021	613	MobiDBLite	consensus disorder prediction	1	29	-	-
	Sebi23g00021	613	Coils	Coil	599	613	-	-
	Sebi23g00021	613	Pfam	Calmodulin binding protein central domain	258	324	IPR046830	-
	Sebi23g00021	613	PANTHER	OS02G0177800 PROTEIN	11	532	IPR012416	GO:0005516
	Sebi23g00021	613	Pfam	Calmodulin binding protein-like N-terminal domain	99	246	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi23g00021	Sebi-Chr23	401610	406128	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi23g00021	11	613	Calmodulin-binding Proteins	AT2G24300	62.969	0.0	750

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi23g00021	-		-	gmx:100775528	1097.42