Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi239g00022 ATGGATCCTCCTACTGACAAAGATTTTGAGAAAAAAGAGATGGATGCAAGAAGTTTGTCATCTTCACATAATCAGGCACCATACGTCCACAAAGTGGCAGTTCCTCCAAGACAGAATCTCTTCAAGGAATTCCAAGCCACTATAAAAGAAACTTTCTTTGCTGATGATCCTCTAAGACCCTTCAAAGATCAACCTAAATCACGGAAATTCATCCTCGGAATTGAGGCCATATTCCCCATACTTAATTGGGGAAGAACTTACAACCTTAAAAAATTTCGGGGGGATATTATATCTGGTCTCACTATTGCAAGCCTTTGCATTCCTCAGGATATTGGATACGCCAAGCTTGCACATTTGGCTCCACAGTATGGACTGTACTCCAGCTTTGTTCCACCACTGATTTATGCTGCCATGGGTAGTTCTCGTGATATTGCAATAGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTTAGTAATGAGATTGATCCTGATACACATGCAGCAGAATATAGGCGACTTGCTTTTACAGCTACTTTTTTTGCTGGGATTACCCAAGCAACACTTGGGATTTTTAGGTTAGGATTCTTGATTGACTTCCTATCCCATGCTGCTATTGTCGGTTTTATGGGGGGTGCTGCCATCACAATTGCTCTTCAACAGCTTAAGGGTTTCCTTGGTATTAAAAGTAAAATGTTCACCACGAAAACTGATATTGTCTCTGTGATGCATTCATGGAACTGGCAAACTATCCTAATCGGAGCTAGCTTTTTGGGTTTCCTTCTGGTCGCAAAATATATTGGAAAGAAGAACAAGAAATTCTTCTGGGTGCCAGCAATTGCCCCATTGATATCCGTTGTGTTGTCCACTTTTTTTGTATTCATAACCCGTGCAGATAAGCAAGGAGTAGAAATTGTAAATCATATACAGAAAGGGATCAATCCTTCATCCATTGAAAAAATTTATTTTAGCGGTGAATACCTTGGGAAAGGTTTTAGAATTGGCGTCCTGGCAGGCATGATAGCATTGACTGAAGCCATAGCAATTGGAAGAACATTTGCATCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTAGCATTAGGAACAATGAATATTGTTGGTTCAATGACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGGTCTGCGGTAAATTTCATGGCTGGCTGTCAAACTGCGGTCTCTAATATTGTGATGTCAATAGTTGTGTTCTTAACCCTGCAATTCATCACTCCTCTTTTTAAGTACACTCCAAATGCCATTCTTTCTGCCATCATCATTTCTGCTGTCATCAACCTTGTGGACTATCAGGCAGCAATTTTGATTTGGAAGATTGATAAATTTGATTTTGTGGCTTGCATGGGAGCATTCTTTGGGGTTGTTTTTGTCTCAGTTGAGATAGGACTTCTAATTGCTGTCTCCATATCCTTTGCAAAGATCTTACTACAAGTCACAAGGCCCCGAACTGCTATTCTGGGGAGGATTCCTAGGACTTCTGTCTATAGAAACATCCAACAATACCCAGAAGCTAGTAAGGTTCCCGGTGCACTGATTGTAAGAGTGGATTCTGCAATATATTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTAAGATGGTTGATAGATGAAGAAGAACAAGTGAAAGGAGACTACCACACAAAAATCCAGTTTTTGATAGTTGAAATGTCACCGGTTACTGACATCGATACCAGTGGCATCCATGCCTTTGAAGAGTTACACAGAAGTCTTGCAAAGAAAGGTGTTGAGCTCGTTCTGGCAAATCCTGGCCCGGTAGTGACGAACAAGCTTTACACATCCAATTTTGCAAACACGATCGGTGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTATTGCGTACTGTTCTCCAAAGCTGGCTGAGGACCCATGA 1950 0.4113 MDPPTDKDFEKKEMDARSLSSSHNQAPYVHKVAVPPRQNLFKEFQATIKETFFADDPLRPFKDQPKSRKFILGIEAIFPILNWGRTYNLKKFRGDIISGLTIASLCIPQDIGYAKLAHLAPQYGLYSSFVPPLIYAAMGSSRDIAIGPVAVVSLLLGTLLSNEIDPDTHAAEYRRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKSKMFTTKTDIVSVMHSWNWQTILIGASFLGFLLVAKYIGKKNKKFFWVPAIAPLISVVLSTFFVFITRADKQGVEIVNHIQKGINPSSIEKIYFSGEYLGKGFRIGVLAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNIVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSIVVFLTLQFITPLFKYTPNAILSAIIISAVINLVDYQAAILIWKIDKFDFVACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGRIPRTSVYRNIQQYPEASKVPGALIVRVDSAIYFSNSNYVKERILRWLIDEEEQVKGDYHTKIQFLIVEMSPVTDIDTSGIHAFEELHRSLAKKGVELVLANPGPVVTNKLYTSNFANTIGEDKIFLTVAEAIAYCSPKLAEDP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi239g00022 649 NCBIfam sulfate permease 79 637 IPR001902 GO:0016020|GO:0055085
Sebi239g00022 649 SUPERFAMILY SpoIIaa-like 520 642 IPR036513 -
Sebi239g00022 649 PANTHER SULFATE TRANSPORTER 38 642 IPR001902 GO:0016020|GO:0055085
Sebi239g00022 649 Pfam Sulfate permease family 92 466 IPR011547 GO:0016020
Sebi239g00022 649 Pfam STAS domain 519 637 IPR002645 -
Sebi239g00022 649 CDD STAS_SulP_like_sulfate_transporter 519 634 - -
Sebi239g00022 649 FunFam Sulfate transporter 31 498 644 - -
Sebi239g00022 649 ProSiteProfiles STAS domain profile. 518 641 IPR002645 -
Sebi239g00022 649 MobiDBLite consensus disorder prediction 1 18 - -
Sebi239g00022 649 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Sebi239g00022 649 Gene3D STAS domain 498 645 IPR036513 -
Sebi239g00022 649 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi239g00022 Sebi-Chr239 551463 555482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi239g00022 4 648 Inorganic Solute Cotransporters AT1G22150 74.885 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi239g00022 K17470 - gmx:100804208 1120.92