Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi239g00021 ATGAATTCAGTGCTCACTGATGCTTCCAGCATGAGAGTTAGAGAGCAGGGACACTTTAATCTTGAGGAGGATACTGGTCAAACAGAGAGGTCCCAGTGGGTGCTGAATTCTCCCACTCCACCACCTCTATGGAAGAAGCTACTTACTCCATTGAAAGACACCAAATTCTTCTTTTCATCCAAGAAGAAAACTTGTCAAGGACATGCTTTTTCCTTCTTGGAGAGCTTATTCCCAATCCTTGTCTGGTTCAGAAATTATAAAGCCACCAAGTTTAAAGATGATTTGCTGGCAGGTTTAACTCTTGCAAGCCTGAGCATACCTCAGAGTATAGGATATGCTAATTTAGCAAGACTTGATCCTCAATATGGCCTCTACACCAGTGTTGTTCCTCCTCTTATCTATGCTCTGATGGGTAGCTCAAGAGAGATTGCAATTGGACCTGTAGCTGTAGTGTCATTGCTGCTATCCTCCCTGGTTCCGAAAGTGGTTGATCCTGCTGGAGATCCTGATGCATACAGAAATACTGTCTTTACCGTGACTTTATTTGCTGGAATCTTTCAATCTGCATTCGGAATTTTCAGATTAGGCTTTCTTGTGGATTTTCTTTCACATGCTGCCCTTGTAGGATTCATGGCAGGCGCTGCCATCATTATTGGTCTTCAGCAGCTCAAGGGGTTGCTGGGGCTTAGTCACTTTACTACCAAAACTGATGCAATATCGGTGATGGAATCTGTTTATAAGTCATTCCATCATCAAATTAAATCTGGAGAAAAATGGTACCCTCTGAATTTTGTCATTGGGAGTTCATTCCTGATTTTCCTTTTAACTTCCAGATTTATTGGCAGAAGAAACAAAAAACTTTTCTGGTTGCCTGCTATTGCTCCTCTTCTATCAGTTGTATTATCCACTTTAATTGTGTTTTTAACAAAAGCTGATAAGAATGGAGTTAATATAGTAAAGCATGTCAAAGGAGGCGTGAATCCAATCTCAGTTCACCAGTTACAACTCAATGGCCAACATGTTGGACAAACAGCTAAAATTGGATTGATTTCTGCTGTTATTGCTCTTACTGAAGCAATAGCTGTTGGTAGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGGAACAAAGAAATGTTAGCAATGGGCTGCATGAACATAGCAGGATCTATGACTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCAGTAAATTTCAGTGCAGGATGTCAAACAGCAGTGTCAAATATTGTGATGGCCATTACTGTGCTTCTGTGCCTGGAATTGTTTACAAGGCTCTTATACTACACTCCTATGGCCATACTTGCTTCTATCATCCTCTCTGCACTTCCTGGATTAATTGACATAAGTGAAGCTCGTTACATTTGGAAAGTTGACAAGTTGGACTTTCTTGCCTGCATTGGTGCTTTCTTTGGCGTCTTGTTTAAATCAGTAGAAATTGGTCTTCTTGTTGCAGTGGCAATCTCGTTTGCAAAGATAATAATACAATCAATTCGACCTGGGGTAGAAGTTCTAGGTAGAATTCCAAGAACAGAAGCCTTCTGCGATGTTATTCAATATCCAATGGCCATAAGCACTCCAGGCATCTTGGTGATTCGCATAAGCTCTGGGTCACTCTGCTTTGCCAATGCTAATGTTGTCAGAGAAAGAATACTTAAGTGGGTCACGGATGAAGGAGATGATAATAAAGAAACTGCCAAGGGAAAGGTCCAAGCAATAATCTTGGACATGACCAACCTGATGAATGTTGATACTTCCGGAATTATAGCACTGGAGGAACTTCACAAGAGGTTGATTTCACATGGTGTACAATTGGCTATGGTCAACCCAAGGTGGTTAGTAATTCACAAGCTTAAACTTGCAAACTTTGTGGATAAAATGGGAAATGAATGGGTTTTCCTAACTGTTGCTGAAGCTGTGGATGCATGTCTGTCTACTAAATTCGCTGAGCCATGA 1986 0.4104 MNSVLTDASSMRVREQGHFNLEEDTGQTERSQWVLNSPTPPPLWKKLLTPLKDTKFFFSSKKKTCQGHAFSFLESLFPILVWFRNYKATKFKDDLLAGLTLASLSIPQSIGYANLARLDPQYGLYTSVVPPLIYALMGSSREIAIGPVAVVSLLLSSLVPKVVDPAGDPDAYRNTVFTVTLFAGIFQSAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGLSHFTTKTDAISVMESVYKSFHHQIKSGEKWYPLNFVIGSSFLIFLLTSRFIGRRNKKLFWLPAIAPLLSVVLSTLIVFLTKADKNGVNIVKHVKGGVNPISVHQLQLNGQHVGQTAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSMTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVLLCLELFTRLLYYTPMAILASIILSALPGLIDISEARYIWKVDKLDFLACIGAFFGVLFKSVEIGLLVAVAISFAKIIIQSIRPGVEVLGRIPRTEAFCDVIQYPMAISTPGILVIRISSGSLCFANANVVRERILKWVTDEGDDNKETAKGKVQAIILDMTNLMNVDTSGIIALEELHKRLISHGVQLAMVNPRWLVIHKLKLANFVDKMGNEWVFLTVAEAVDACLSTKFAEP 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi239g00021 661 Pfam Sulfate permease family 91 477 IPR011547 GO:0016020
Sebi239g00021 661 NCBIfam sulfate permease 78 649 IPR001902 GO:0016020|GO:0055085
Sebi239g00021 661 SUPERFAMILY SpoIIaa-like 535 653 IPR036513 -
Sebi239g00021 661 FunFam Sulfate transporter 31 509 656 - -
Sebi239g00021 661 Pfam STAS domain 530 649 IPR002645 -
Sebi239g00021 661 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Sebi239g00021 661 PANTHER SULFATE TRANSPORTER 59 654 IPR001902 GO:0016020|GO:0055085
Sebi239g00021 661 CDD STAS_SulP_like_sulfate_transporter 530 646 - -
Sebi239g00021 661 ProSiteProfiles STAS domain profile. 546 653 IPR002645 -
Sebi239g00021 661 Gene3D STAS domain 509 656 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi239g00021 Sebi-Chr239 507056 511241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi239g00021 27 657 Inorganic Solute Cotransporters AT5G10180 64.420 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi239g00021 K17469 - gmx:100805269 1060.83