Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi238g00041 ATGATGGAACAAAAATTTGGGGATAATTTGATTAACATGCATGGATTAACTCTCCCTCTCCCTCTTTCTCCAAACAACTTTCTTTCTTGTGCTCACCCTCACCTTGCCTTAAGATCTCTTCAACCATTTTCATGCCTCCAAAACCAAAATTCAGCGACTTTTTCCATACCCAGTTGCAAAATCAGCTACGGAAGTGGTTTCAATCCCCTCGTGCTCCATTCACGCTACCACAACAACAGGAAGCATGTGAAGAAAGGAAGAGGTAGCAATAGAATCATCGTTGTGAGAGCAAGCCGTGGTGAGTCTCCTTATGAGGTTCTGGGCTTGTCACCATCCGCAACAGTGGATGAAATCAAGAAGGCGTATCGGAAACTTGCCCTCAAGTATCATCCAGATGTCAATAAAGAGGTAATTGGTATGTTAGCAAATGTTTGTTATTCCTCTCTCAGTAGTGTATCTTGGTGTCAGTTTGGAAATGTTAAGGTTAAACAGACAAGACATCAAGGGATTTGGTAA 516 0.4205 MMEQKFGDNLINMHGLTLPLPLSPNNFLSCAHPHLALRSLQPFSCLQNQNSATFSIPSCKISYGSGFNPLVLHSRYHNNRKHVKKGRGSNRIIVVRASRGESPYEVLGLSPSATVDEIKKAYRKLALKYHPDVNKEVIGMLANVCYSSLSSVSWCQFGNVKVKQTRHQGIW 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi238g00041 171 Gene3D DnaJ domain 75 144 IPR036869 -
Sebi238g00041 171 ProSiteProfiles dnaJ domain profile. 102 154 IPR001623 -
Sebi238g00041 171 CDD DnaJ 103 150 IPR001623 -
Sebi238g00041 171 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 55 136 - -
Sebi238g00041 171 PRINTS DnaJ domain signature 104 122 IPR001623 -
Sebi238g00041 171 PRINTS DnaJ domain signature 122 137 IPR001623 -
Sebi238g00041 171 SMART dnaj_3 101 154 IPR001623 -
Sebi238g00041 171 Pfam DnaJ domain 103 135 IPR001623 -
Sebi238g00041 171 SUPERFAMILY Chaperone J-domain 73 136 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi238g00041 Sebi-Chr238 843077 843592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi238g00041 97 132 C2H2 Transcription Factor Family AT1G74250 52.632 5.81e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi238g00041 - - lja:Lj0g3v0138489.1 164.466