Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi238g00029 ATGGATGATACTTCTGATGAACAAGAGGGAAGAAGAGGTAGCAAGCTTTCAGCTGTCTTTTCTGACAATTCAGAACCACCAGAGATCTTAGATGAGGTACTGCTTTGTCAGCAAGGGAAAAGTCAACCCCTTTGTGCTGCTACTGAACCACCACATAGTGTTGATTCAGGAAGAGGATCCAATGGAAAAGCAGCACGTTCTCGTTCAAAGAAAGGGTCTACCAACACAGGTGCAACTGTAGATTTGTGGACCCTGCTAACTCAATGTGCACAGGCTGTTGCAAACTATGACCAAAGGAATGCAAATGACTTACTCAACCAGATTAGGCAACACTCTTCACCTTATGGGGATGGACTTCAGCGTTTAGCTCATTACTTTGCCAATGGCCTTGAGACAAGACTGACTGCTGGGACCCCATCATATAAGCCCCTAGAAGTGGCAAATGCTGCTGATATGTTGAAAGCTTACAAACTATTTGTCACTGCATCTCCTTTGCAAAGGATGACAAATTTGTTTACAACCAAAACTATTATTAGTCTAGTGAAAAATGAGAGCAGTGTTCATATTATTGACTTTGGCATTTGCTATGGTTTTCAGTGGCCTTGCCTTATCAAAAGACTGTCACTAAGACATGGTGGTCCTCCAAAGCTTCGTATAACAGGAATTGAACTTCCTCAGCCAGGATTTCGGCCTGCCGAAAGGGTGGAGGAGACAGGGCGGCGTCTGGGAAACTACTGCAAGAAGTTCAATGTTCCATTTGAATACAATTGCCTTGCACAGAAATGGGAAACTATCAGGCTTGAGGATCTCAAGATAGATAGGAATGAAATAACTGTTGTTAGCTGTTTGTACCGGCTGAAGAACCTGCCTGATGAGACTGTGGCAGTGAACTGTCCAAGAGATGCTGTGTTGAAGTTGATCAGGAGGATCAATCCAAACATCTTCTTCCATGGGATTGTCAATGGCACTTATAATGCACCATTTTTCCTGACTCGGTTTAGGGAGGCACTTTACCACTTTTCATCACTGTTTGATATGTTTGAGGCTAATGTGCTTTGTGAGGACCAAGAAAGGGTGATACTTGAGAAAGGGTTGTTTGGAAGGGATGCCATCAATGTGATAGCAGGTGAGGGGGCAGAGAGGGTTGAGAGGCCTGAGACCTATAAGCAGTGGCAGGTTAGGAACCGTAGAGCTGGTTTCAAGCAAATCCGGTTAGATCCTGAATTGGTGAATCAATCCAAAGCAATGGTGAAGAGAGAATATCATAAAGATTTTGTAGTTGATGAGGATGGCAAGTGGGTTTTGCAGGGATGGAAAGGGCGTATTCTGAATGCTTTTTCTGCTTGGGTTCCTGCTTAA 1359 0.4393 MDDTSDEQEGRRGSKLSAVFSDNSEPPEILDEVLLCQQGKSQPLCAATEPPHSVDSGRGSNGKAARSRSKKGSTNTGATVDLWTLLTQCAQAVANYDQRNANDLLNQIRQHSSPYGDGLQRLAHYFANGLETRLTAGTPSYKPLEVANAADMLKAYKLFVTASPLQRMTNLFTTKTIISLVKNESSVHIIDFGICYGFQWPCLIKRLSLRHGGPPKLRITGIELPQPGFRPAERVEETGRRLGNYCKKFNVPFEYNCLAQKWETIRLEDLKIDRNEITVVSCLYRLKNLPDETVAVNCPRDAVLKLIRRINPNIFFHGIVNGTYNAPFFLTRFREALYHFSSLFDMFEANVLCEDQERVILEKGLFGRDAINVIAGEGAERVERPETYKQWQVRNRRAGFKQIRLDPELVNQSKAMVKREYHKDFVVDEDGKWVLQGWKGRILNAFSAWVPA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi238g00029 452 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 67 443 IPR005202 -
Sebi238g00029 452 MobiDBLite consensus disorder prediction 1 26 - -
Sebi238g00029 452 MobiDBLite consensus disorder prediction 60 75 - -
Sebi238g00029 452 MobiDBLite consensus disorder prediction 44 75 - -
Sebi238g00029 452 ProSiteProfiles GRAS family profile. 73 450 IPR005202 -
Sebi238g00029 452 Pfam GRAS domain family 84 449 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi238g00029 Sebi-Chr238 545499 546857 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi238g00029 12 452 GRAS Transcription Factor Family AT1G07530 53.965 3.77e-167 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi238g00029 GRAS 1.9e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi238g00029 - - aprc:113855970 787.334