Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi238g00026 ATGGATCTTGGAAGCGGTTTTTACAATTTCGATGAAGAAGGGAACTTAGTTCTACTCCCCGATCCAAACGAGTACCAATACCAAAACCTTGTCAATTTCACCACCACCGATGTGGGACCACCTAGTTTTGCTCCACACACCGTTTTCAACCCTGGACCGCTTCTTCCTTCCTCGATTGCCGCCATGTCCACAGTGGCGGATCCTTCACTGGAAGACACAGATTTCTCAGAAACCGTCAAGTACATAAGCCAGATTCTTATGGAAGAGGACTTTGAGCAGAAACCATGTATGTGTTTTGACCCGCTGAGTCTAGAACACACTGAGAAAGCTTTCTATGATGCCCTTGAAGCTGAATTGCCTCTTTCCCCCAATCAACACCCTCTTGACATTCTGGAGTTTCCCATTGGGAATTGTTCCACTTCCACTACTGATTCTGGTAGCAGTGGCAGCGCCAATTCTCACGAGTTGAAGCCTCCTTCCCCTGATACTCCTGTTTCTGGTGATTCTGCTATGTTTTCCATTTCCCATACGCACTCTCAATTTGTTCCTCAGCATGCTTTGACTAATATTAGTGATGGGGTTTTGGATTTGGATTCTTCTGTTACCAAGATTTTGGCTCAAAATATCTTTAGTGATGAAAACTCTATGTTGCAGTTTAAAAGAGGGTTAGAGGAAGCTAGTAAGTTTCTTCCTCAAAGACCTCAGCTTTTCACTGGTCTGGAGAAAACCACAGTGGCTGCAGAGCCAAAAAGAGAGGTTGGAGCCAAGATGGAGTATGGTGTTAGGGAGAATTCACATGGGGTGTTGAAGAGTAGAAATAGAAAGAATTCACATGAGCGCCAAGGTAGTGATGATGAGGAAGGAAGAAGCAACAAGCAGTCTGCTGTTTGTGTTGAAGAAGAGAGTGAAATATCTGAAATGTTTGATAGGGTTTTGCTTAGTGTTGAAAATGTGCCACTGTGTGCTGAACAAGATGATGGATCAGTCATAGAGAATAACACACATTCTGGTGAACAACCACATTCATCTGATGGAGGCAAGACTCGTTCTAAGAAACAAGGAAGGAAGAAGGAAGCAGTGGATTTGAGAACCCTTTTGATTCTGTGTGCACAAGCTTTGTCTGCCAATGACAACAGGACTGCTAATGAACTGCTAAAGCAGATTAGGCAGCATTCTTCTCCCTCAGGTGATGCACCACAGAGGTTGGCTTATTACTTTGCAAATGGCCTAGAAGCACGTTTGGTTGGTGCTGGTTCTAGAACCAAAATACTTTATATGAGCCTAAAGAATTTCACTGCTGCTGATTTCCTGAAAGCTTACCAAGTTTTTATATCTGCTTGCCCTTTCAAGAAAATTGCACATTTCTTTGCAAATAAAATGATTCTAAAGACAGCTGAAAAGGCAGAGACCCTTCATATTATTGATTTTGGTATTCTGTATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTATCAAAAAGAACTGGTGGACCTCCCAAGCTACGCATCACAGGAATAGAGTATCCTCAAGCTGGCTTTCGTCCCGCAGAGAGAATTGAGGAAACTGGTCGGCGTCTAGCTAAATATTGTGAGCGTTTCAATGTTCCATTTGAGTACAAGTCCATAGCATCAAGAAACTGGGAAACCATTCCAATTGAAGATCTTGAAATTAAGAGCAATGAGGTACTTGCTGTGAACTGTCTGATAAGGTTTAAGAATTTACTTGATGAGACAATTGAAGTGAATAGTCCTAGAAATGCAGTTCTGAAGCTAATCAAGAAGATAAATCCGGATATTTTTGTTCAATCTGTAGTAAATGGATCTTATAATGCCCCTTTCTTTGTCACACGCTTCAGGGAGGCACTTTTCCATTATTCTGCTATTTATGATATGTATGATACTCTCATATCCCGTGCAAATAAATGGAGGTTGATGATTGAAAGAGAGTTTTTGGGTCGGGAGATTATGAATGTTGTATCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAATACCAGGGCTGGTTTTAGGCAGCTCCAACTGGATAAGGAGCTAATGGCCAAATTTAGAGGTATGTTCAGAGAATGGTACCACAGAGATTTTGTCTTTGATCAAGATAACAACTGGATGCTTCAAGGTTGGAAAGGCCGGATTTTGTATGCTTCAGCTTGTTGGGTGCCTGCATCATGA 2217 0.4195 MDLGSGFYNFDEEGNLVLLPDPNEYQYQNLVNFTTTDVGPPSFAPHTVFNPGPLLPSSIAAMSTVADPSLEDTDFSETVKYISQILMEEDFEQKPCMCFDPLSLEHTEKAFYDALEAELPLSPNQHPLDILEFPIGNCSTSTTDSGSSGSANSHELKPPSPDTPVSGDSAMFSISHTHSQFVPQHALTNISDGVLDLDSSVTKILAQNIFSDENSMLQFKRGLEEASKFLPQRPQLFTGLEKTTVAAEPKREVGAKMEYGVRENSHGVLKSRNRKNSHERQGSDDEEGRSNKQSAVCVEEESEISEMFDRVLLSVENVPLCAEQDDGSVIENNTHSGEQPHSSDGGKTRSKKQGRKKEAVDLRTLLILCAQALSANDNRTANELLKQIRQHSSPSGDAPQRLAYYFANGLEARLVGAGSRTKILYMSLKNFTAADFLKAYQVFISACPFKKIAHFFANKMILKTAEKAETLHIIDFGILYGFQWPILIKFLSKRTGGPPKLRITGIEYPQAGFRPAERIEETGRRLAKYCERFNVPFEYKSIASRNWETIPIEDLEIKSNEVLAVNCLIRFKNLLDETIEVNSPRNAVLKLIKKINPDIFVQSVVNGSYNAPFFVTRFREALFHYSAIYDMYDTLISRANKWRLMIEREFLGREIMNVVSCEGFERVERPETYKQWQVRNTRAGFRQLQLDKELMAKFRGMFREWYHRDFVFDQDNNWMLQGWKGRILYASACWVPAS 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi238g00026 738 MobiDBLite consensus disorder prediction 328 355 - -
Sebi238g00026 738 MobiDBLite consensus disorder prediction 256 298 - -
Sebi238g00026 738 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 301 730 IPR005202 -
Sebi238g00026 738 Pfam GRAS domain family 362 734 IPR005202 -
Sebi238g00026 738 MobiDBLite consensus disorder prediction 256 296 - -
Sebi238g00026 738 MobiDBLite consensus disorder prediction 139 159 - -
Sebi238g00026 738 ProSiteProfiles GRAS family profile. 353 735 IPR005202 -
Sebi238g00026 738 MobiDBLite consensus disorder prediction 139 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi238g00026 Sebi-Chr238 534244 536460 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi238g00026 78 738 GRAS Transcription Factor Family AT1G07530 49.713 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi238g00026 GRAS 4.9e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi238g00026 - - cam:101504630 1070.84