Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi238g00023 ATGGATAAAAGAGGTTATCCACAAGATGCAACAAATCCTCCTGTTTCCCTCAACAAAGAGAACGAGAGTGAGAGTAACCTCCATGCTACCCTTGCCAACATAAACCAAATTCTCATGGAAGATGACGTGGACGAGAATTACAGTATCTTCCAAGATTCCTTGGCTCTCCAACATGCTGAGAAATCATTTTATGATGTTATTGGTGAGAACTACCTTCCTCCTCCCCCTCCCTCTTCCCTCCAGTATCTTCCTTACAGTTACCCCACAGTGGATAGCCCTGACCAAAGTCTCTCCAGTACTTACAGTGATTATAGTTTTAGCAGTGGCACTTCCACCAGTACTGCTGATTCTGCAGAGTACAACCCCAACCCCCTTATTCCTCCACCCAATTTTCCCATTCCTCCTACTAACTATGTTTTTAATTTTCAGTCCACCACAAATAATAGATCAGGGAATCCAATGGCTGGATTTCAAGATCCAACAATATTGCTTAGCGAGAGTGAGTTTCTTCAATTCAAGAGAGCCATGTTCCTCTCTAACCAATATCTCAGTCCATTCATTATTGACCCTGCTTACACAAACACAACCTTTTCCCCTTCTTTCAGAACGGTTCCTCAGGTGGTAATCAAGACAGAAGAAGAAGAATTTCATGAAGAGGATGTGTCACAAGGGAGCAAAATTCTCCACCATCAAGATCAAGATGAAGTAGAAGATGGGAGAAGCACTAGCATGGAAGGCAATGAGTTATCAGAATTGTTTGATAAGATTCTGCTGCTGGGAGCTACTCAGCAAACTGATGAATCAAGCACAAGTAGTTCTAGTGGTGGAAAGAGCCTTGTGAGGAGACAGAGCAATAGTGAGGAAGTTGTGGATTTGAGGACACTATTGCTGCTATGTGCACAAGCTATTTCTTCTAATGATCTTTCAACAGCTAACCAGTTGTTAAAGCAGATTAAGCAGCATTGTTCTAGAATGGGTGATGGGACTCAGAGATTGGCCTATTTCTTTGGGAATGCCCTTGAAGCACGCTTAGATGGCACTGGTCCAATGATTTATAGTGCTTTATCTTCTAAGAAAAACACTGCTGCTGATATGATAAAAGCTTACCAAGTGTATGCCTCAGCTTGCCCATTTGATAAGCTTGCAATCATTTTTGCAAACAATTCAATTTGGAACAAAGTCAAGGAAGTTGAAACTCTTCACATTATAGACTTTGGTGTTGGTTATGGCTTCAAATGGCCTGCCTTTATTAACCGTTTATCAAAAAGAGAAGGTGGGCCACCCAAGTTGCGCATCACAGGGATAGAGTTTCCACAACGTGGTTTAAGGATTCAGGAGACAGAGCATCGACTTGCAAGCTATTGCAATCGCTTCAATGTTCCATTTCAGTTCAATGCTATTGTAAAGAGATGGGAAACCATCCAAGTTGAGGACCTCAAAATAAAGGAAAATGAATTTGTGGCTGTCAATTGCTTGTTTCGCTTTGATAATCTACTTGATGAGACGGTTGTGATGGATGATCAAAGGGGTGCTGTTTTGAGTTTAATTAAGAAGGCAAATCCTGGCATATTTGTGCAGAGCATTGTTAATGGTTGCTATGATGCACCTTTCTTTGTCACACGGTTCAGAGAGGCTCTTTATCATTACTCAGCAATGTTTGACTTGCTTGACAACAATGTTGCTCGTGAAGATCCTATGAGGTTGATGGTGGAAGAGGAGTTTTGTGGAAGGGAGATAGTGAATATCATAGCTTGTGAAGGTTGTGACAGGGTTGAGAGGCCAGGGACATACAAGCAATGGCAGTATAGGAACATGAGAGGTGGGTTTAGGCAGCTTCCCATGGATTACCAAATTATTAACAAATTAAGGGATAGGTTGAGAAATGATGCTTACAACAGTAATTTCATGCTTGAAGTGGATGGAAATTGGATGCTACAAGGTTGGAAGGGTCGAATTCTATATGCTTCCTCATGTTGGGTACCAGAATAG 1989 0.4163 MDKRGYPQDATNPPVSLNKENESESNLHATLANINQILMEDDVDENYSIFQDSLALQHAEKSFYDVIGENYLPPPPPSSLQYLPYSYPTVDSPDQSLSSTYSDYSFSSGTSTSTADSAEYNPNPLIPPPNFPIPPTNYVFNFQSTTNNRSGNPMAGFQDPTILLSESEFLQFKRAMFLSNQYLSPFIIDPAYTNTTFSPSFRTVPQVVIKTEEEEFHEEDVSQGSKILHHQDQDEVEDGRSTSMEGNELSELFDKILLLGATQQTDESSTSSSSGGKSLVRRQSNSEEVVDLRTLLLLCAQAISSNDLSTANQLLKQIKQHCSRMGDGTQRLAYFFGNALEARLDGTGPMIYSALSSKKNTAADMIKAYQVYASACPFDKLAIIFANNSIWNKVKEVETLHIIDFGVGYGFKWPAFINRLSKREGGPPKLRITGIEFPQRGLRIQETEHRLASYCNRFNVPFQFNAIVKRWETIQVEDLKIKENEFVAVNCLFRFDNLLDETVVMDDQRGAVLSLIKKANPGIFVQSIVNGCYDAPFFVTRFREALYHYSAMFDLLDNNVAREDPMRLMVEEEFCGREIVNIIACEGCDRVERPGTYKQWQYRNMRGGFRQLPMDYQIINKLRDRLRNDAYNSNFMLEVDGNWMLQGWKGRILYASSCWVPE 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi238g00023 662 Pfam GRAS domain family 292 659 IPR005202 -
Sebi238g00023 662 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 248 655 IPR005202 -
Sebi238g00023 662 ProSiteProfiles GRAS family profile. 283 660 IPR005202 -
Sebi238g00023 662 MobiDBLite consensus disorder prediction 263 283 - -
Sebi238g00023 662 MobiDBLite consensus disorder prediction 216 244 - -
Sebi238g00023 662 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi238g00023 Sebi-Chr238 501216 503204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi238g00023 30 661 GRAS Transcription Factor Family AT1G07530 47.688 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi238g00023 GRAS 5.3e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi238g00023 - - gmx:100793066 661.373