Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi238g00010 ATGGGAAAGCATTTGATTCCTTCTGATCAGTCCACTGTTCAAACTCGGGACAATAATCCAGGATGCATGTGGGGCATACTTCATATTCTTGATTACCATCATTGGCGTGTCAAAAAGGTGCTTCCTCACAAAAGGAGACGACAAGCCAGATATAAGAAAAAAACCATTTTGCATATCCAAGGTGAAGAAGACCAACAATATGGAGTTGCAGAAGGAGAACCCCTCCTGGTCGGGCAACATAGCAAAAAATTGAGTGCAACAGGAAAAAATTCTCCCAAAAATCTCAAAAAGGAACCACGATCTGAAAAAAGGGAGAATTCACTTCATCAAGAGAAAGATGGCAAGACAACAGAAGCTTCCCTTAACCATAAGCGTATGGAAACAACCAAGCTTAACAGAGACATTTCCAATAAATTTAAGAAACATACTGATGTTTTGGAGTTAATTAGTATGGAGAAGGATTTATTGCTTAAGTTTCTAAGAAATTTAGATGTTGGTGGGAAAAACTTCCATCAAGCTTCCCTCAACAGAACAAGAAGATTGACAAAATCAGGGTCATTTCCTTTAACCGCACCTTCACCGGTGAAAAACTTCAGCTCTAGTACCTTCAAACACAAGCAATACGAAATTTGGGCCTTCCCCAAGGGAGAAAAGTTGCTTGCTGGTACTCATGAACCAAATAATTCTGCATCCAGTTTTGTGAAAGATGTTTCTTATGAGAATCCAATGCCTTCAGTGAATGATCTTGGCTCAGATAGTGCCATGAAACAAAAACCAAGTGTTTCTTCAAGGGCTTCTGAAGGGTTAAATCACAAAGGGTGGAATCAATTGGTTCTTCATCAATTCAAAGTTATAAAACAGAAGATAATACATGCTCTTGTGGAGTTCAAAAAAAGTGGTTACCAAACTTCTGTCCAAGCCATCCACCATAGAGCTTCACTTGAATATAGCATCACCAATGATGAGAAAGAGATCTCACAAAGCTTAGATGATGGCATGGCTCAAGAATACAAAAAGAATAAAAGCTCCAATGACACTAAAGCTTCTGAATATGATTCCGATAAACATGAAGCTCGCCTAATACGAAGAACTTCCTCTCTTAATGAATCGGTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGAAAAGATGACAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAGATTGACAAATGAGGATAAGATTCACAAGACTGGGCTTGCTCCTGTGTTTTCCAGAAGCAATTTGTCTATGCCTAATCTTGAGTCCTTAGGCTTCATTTTACATGAGGCACTTAATGATACAAATGACATGGGGAACACAGTGGAAACTGATGATCATGTTCAAAGAAAATCAGGGAGCCTTCCTTTAAAGAATGACAAATCACTTGATCATATTAAAGAGGAAGAAATTGAGGAAACAGTAGAAGGGAGTGGCAAGGATGTGAATCCCAGTCATTTATCTGATAAGATTGTGGAGAAAATTGATGAAGAAATTACCTGTGACCAAAAGGAGGACACACATGAGCCAGCGGTGGGAGATGAAAGTTTTCCTCAACAAAAAGAGGAAATAAGTATGACTTCCTATCTTAGCAATGAGGTGATGATATCTCTTGAAACTAGCTGTGAAGACAATACAACCAGCCATGCAGAAGGTAGAGAATTGAATACCAAAGGCTCCACATTGGCCGAATTGGAGACTGATTTACCAAGCAGAGAAAGTGCAACAACCAATGACACATGCAAGAATCCTGACAATCATTTCCAGCTCTTCAAATCAGATGCAGACAATGATTTCAATTTCATATATGTGAAAAATGTTCTTGAACTTTCAGGCTTCATGAGAAATGAGCAGATTCAAATGCGATACTCAGTAGACCAGCCACTAAGGCCCTCCTTATTCATGGATTTGGATGCGGCTATCCACAAGGATATTGAATCCTATGGAGAAGAGATCATCAACCCATATGATCACCAGCTTCTTTTTAACTTAGTTAATGAGGTGCTCCTTGAAATATATGAGATTTCACCAACTTACTTCCCAAGGCCCTTCTCCTTCAACTACCACCTCCATCCAATGCCTAAGGGACACTATCTTCTTAAAGAAGTATGGAAAAGTATTAATTCATACCTGAGCTTGAAACCAGAGCTGGATCAAACATTAGATGATGTTGTGGGTCGTGATTTGGCAAAAAGAAGTGGCTGGATGAACCTTCAACAGGAAGAGGAGTGTGTAGCACTTGAACTAGAGGAGATGATCATGGAAGATTTATTAGATGAAGTTATCTTCTCATGA 2301 0.3907 MGKHLIPSDQSTVQTRDNNPGCMWGILHILDYHHWRVKKVLPHKRRRQARYKKKTILHIQGEEDQQYGVAEGEPLLVGQHSKKLSATGKNSPKNLKKEPRSEKRENSLHQEKDGKTTEASLNHKRMETTKLNRDISNKFKKHTDVLELISMEKDLLLKFLRNLDVGGKNFHQASLNRTRRLTKSGSFPLTAPSPVKNFSSSTFKHKQYEIWAFPKGEKLLAGTHEPNNSASSFVKDVSYENPMPSVNDLGSDSAMKQKPSVSSRASEGLNHKGWNQLVLHQFKVIKQKIIHALVEFKKSGYQTSVQAIHHRASLEYSITNDEKEISQSLDDGMAQEYKKNKSSNDTKASEYDSDKHEARLIRRTSSLNESVDRYTQLFEKSFRKDDKWQSSKSKSLRLTNEDKIHKTGLAPVFSRSNLSMPNLESLGFILHEALNDTNDMGNTVETDDHVQRKSGSLPLKNDKSLDHIKEEEIEETVEGSGKDVNPSHLSDKIVEKIDEEITCDQKEDTHEPAVGDESFPQQKEEISMTSYLSNEVMISLETSCEDNTTSHAEGRELNTKGSTLAELETDLPSRESATTNDTCKNPDNHFQLFKSDADNDFNFIYVKNVLELSGFMRNEQIQMRYSVDQPLRPSLFMDLDAAIHKDIESYGEEIINPYDHQLLFNLVNEVLLEIYEISPTYFPRPFSFNYHLHPMPKGHYLLKEVWKSINSYLSLKPELDQTLDDVVGRDLAKRSGWMNLQQEEECVALELEEMIMEDLLDEVIFS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi238g00010 766 Pfam Protein of unknown function (DUF3741) 122 161 IPR022212 -
Sebi238g00010 766 PANTHER PROTEIN TRM32 1 766 IPR044257 -
Sebi238g00010 766 MobiDBLite consensus disorder prediction 93 128 - -
Sebi238g00010 766 MobiDBLite consensus disorder prediction 80 128 - -
Sebi238g00010 766 MobiDBLite consensus disorder prediction 244 267 - -
Sebi238g00010 766 MobiDBLite consensus disorder prediction 336 355 - -
Sebi238g00010 766 Pfam Domain of unknown function (DUF4378) 603 762 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi238g00010 Sebi-Chr238 129326 132495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi238g00010 140 756 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.140 7.91e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi238g00010 - - gmx:100784103 988.408