Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi237g00001 GCTCGTCGGGAATTTCAAACACTCAAAGGTGTCATACAACTGCAAGCTATTATTCGTGGCCACTTGGTTAGAAGACAAGTTGTTTCTGCTTTATACTGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGCTCGTGGTTACAATGTTAGGCGTTCTGCTATTGGACGCGAAGTCCTGAAAATTCGCAAG 189 0.418 ARREFQTLKGVIQLQAIIRGHLVRRQVVSALYCVKGIVKFQALARGYNVRRSAIGREVLKIRK 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi237g00001 63 ProSiteProfiles IQ motif profile. 9 36 IPR000048 GO:0005515
Sebi237g00001 63 SMART iq_5 6 28 IPR000048 GO:0005515
Sebi237g00001 63 SMART iq_5 32 54 IPR000048 GO:0005515
Sebi237g00001 63 PANTHER IQ-DOMAIN 5-RELATED 1 51 - -
Sebi237g00001 63 Pfam IQ calmodulin-binding motif 35 52 IPR000048 GO:0005515
Sebi237g00001 63 Pfam IQ calmodulin-binding motif 9 26 IPR000048 GO:0005515
Sebi237g00001 63 Gene3D - 6 53 - -
Sebi237g00001 63 ProSiteProfiles IQ motif profile. 35 60 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi237g00001 Sebi-Chr237 116333 116521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi237g00001 1 58 IQD Protein Family AT1G18840 67.241 9.07e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi237g00001 - - tpra:123907401 107.457