Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00083 ATGAGCAAATTGCAATATCTGGACATTTATAGTAAAGGGTCTTGTATCTTGGATAGAGGTGGCTTGAATCTTACTCAAGGGCTTGAATATTTGCCAAATGAGCTCACATTTCTTCGTTGGGTGCATTATCCATTGGAATCCTTGCCATCCAAGTTTTCTGGGGAAAAGCTTGTTGTACTGAACTTGCAGTATAGCAGAGTGAACAAACTTTGGCATAAAGTGCCGGATCTTGTGAATTTAAAGGTTCTTATACTCAGTTTATCTTCACACTTGGTGGAGTTTCCAGACTTGTCAAAGGCCACAAATCTTGCAGTAATAGATCTGCGTCTCTGTGTAAGATTGACAAGTGTGCATCCCTCAGTTTTTTCTCTCAACAAGCTTGATAAATTGGATCTAGGTGGATGCATTTCCCTTAAAAGCCTTCCAAGCAATATCCATCTAAGCTCCCTTCGTTACCTCTCCCTAGCTGGTTGCCTTTCACTAAAGGAATTCTCAGTGACCTCAAAGAATATGAAGAAATTGAATCTACAACTCACAGGTATCAAAGAATTGCCCTCATCATTTGGACTTCAAAGCAAACTTGAGAAGCTACTTCTTGCATACACTTACATTCAGCACTTGCCTGAAAGCATCAAGCATCTTTCAAAGCTGCGACATTTAGATTTAAGGCATTGCAGGGAGCTTAGGAGTCTGCCAGAGCTTCCATCATCACTAGAAACACTAGATGCTAGTGGATGTGTATCACTTGAGACCATAACCTTCCCTTCAACATTAACAGAACAACTGAAGGAAAACAAGAAAAGGGTTGCATTCTGGAATTGCCTGAAATTGGATCAACATTCTCTCAAGGCTATTGGGCTGAATGCACAAATTAACATGATGAAGTTTGCATACCACCATATATCCACATTTGGGCCCAATTATGGAACCTATGTGTATCCAGGAAGCAGTGTTCCACATTGGTTGGTGTATAGGACAACAGAGAATTACATAACTGTTGATCTATCTTTTGTTACACATTCCTCTGAACAGTTGGGCTTCATTTTTTGCTTCATTGTTCCAAAAGTCACATCAGATGGTTTGATTTTGATATTTAACATCAATGCTGGTGAAGGGGAAGGTAATGGAATTAATGTGTACTTGGATAGGCCAAGTCGTGGGATTAAATCAGATCATGTGTATCTAATGTATGACAAGGGATGTTCTCACTACCTAATTAGCAGAGCCAAACATCAACCAAAGTTTAAAATTAAGGTTACAGCAGTTTCTGGAACACTGACATCACTGTACGTGCCTTTGTTGATACGAGGGTTCGGTCTCATCCCAATAAATACATCAGAATATTTCAATTTGATTCAGCAAATGGAATTGGCTGATGATCGTGCTCCGAGTATCACAATCTCATTATTGAGTGTTTTTTATAGCTTTTACTTGTATATTTTGTTACCATTATTCATAGAGCTACTCATAAAGTTTGATGTTTGA 1485 0.3886 MSKLQYLDIYSKGSCILDRGGLNLTQGLEYLPNELTFLRWVHYPLESLPSKFSGEKLVVLNLQYSRVNKLWHKVPDLVNLKVLILSLSSHLVEFPDLSKATNLAVIDLRLCVRLTSVHPSVFSLNKLDKLDLGGCISLKSLPSNIHLSSLRYLSLAGCLSLKEFSVTSKNMKKLNLQLTGIKELPSSFGLQSKLEKLLLAYTYIQHLPESIKHLSKLRHLDLRHCRELRSLPELPSSLETLDASGCVSLETITFPSTLTEQLKENKKRVAFWNCLKLDQHSLKAIGLNAQINMMKFAYHHISTFGPNYGTYVYPGSSVPHWLVYRTTENYITVDLSFVTHSSEQLGFIFCFIVPKVTSDGLILIFNINAGEGEGNGINVYLDRPSRGIKSDHVYLMYDKGCSHYLISRAKHQPKFKIKVTAVSGTLTSLYVPLLIRGFGLIPINTSEYFNLIQQMELADDRAPSITISLLSVFYSFYLYILLPLFIELLIKFDV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00083 494 Gene3D Ribonuclease Inhibitor 164 285 IPR032675 -
Sebi236g00083 494 Gene3D Ribonuclease Inhibitor 1 163 IPR032675 -
Sebi236g00083 494 Pfam C-JID domain 313 406 IPR045344 -
Sebi236g00083 494 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 168 258 - -
Sebi236g00083 494 Pfam Leucine rich repeat 170 226 IPR001611 GO:0005515
Sebi236g00083 494 SUPERFAMILY L domain-like 17 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00083 Sebi-Chr236 1240904 1242760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00083 1 257 WRKY Transcription Factor Family AT4G12020 39.179 3.41e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00083 - - gmx:100802823 639.417