Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00082 ATGGAGTACTATGAACTAGCAAAGAAGATGGTTGATTATGCCAAAGGTGTTCCATTAGTTCTTAAAGTTTTAGGCCACCTTCTTCATGGAAAAGTTAATGACATAAAACGGTTACTGAAAGATCGTCAGTATTCAGTGACTATGGGGTTAGAAAGGCTAAAAGATAAAACCCTAATAACCATTTCTCAAGAGAATATTGTATCAATGCATGACCTTATTCAAGAAATGGCTTTGGAGATTGTCCGGGAAGAATCTATTGAAGACCCTGGAAGACGAAGTCGATTATTAGATCCTGAAGACATTTATGAAGTACTGAAATATAACAAGGGGAGTGAAGCCATTAGAAGCATGGTCGTCAACATGACTATAATTAAGCAGCTACAGTTAAGCCCTCAAGTGTTTGATAAAATGAGCAATCTACAATTTTTGGATATTTATGCTAAAGGGTCTCATAGTTTCATCCATGATGATGAAAGGGGTTTGTATCTTCCTCAAGGGCTTGAATCATTGCCTAATGAACTAAGATATCTTCGTTGGGCATATTACCCTTTGGAATCCTTGCCATCCAAGTTTTCTGCTGAAAAACTTGTTGTATTGATATTGCCACATAGCAGAGTGAAAAAACTTTGGCATCAAGTACAGGATCTTGTGAATTTGAATGTCCTTGTACTCTGTTCATCCACACAACTGATGGAGCTGCCAGATTTTTCAAAAGCCACAAGTCTTAAAGTTATTGATCTCCGTCATTGTGTAGGGTTGACAAGTGTGCATCCATCTGTTTTGCCTCTCAACAAGCTTGAAAAATTGGATCTAAGTGGATGCATTTCCCTTACAAGCCTTCAAAGCAATACCCATTTAAGTTCACTTCGTTCTCTCTCCCTCTGTGGCTGCACAGCACTAAAGGAATTCTCAGTAACCTCAGAGAATATGATCCAATTGAATTTAGAACACACAGGTATCAAACAATTGCCCTCATCTATTGGACTTCAAAGCAAACTTGAAAAGCTACATTTAGGATACACTAACATTGACAACTTACCTGAAAGCATCAAGCACCTTACAAAGCTGAGACATTTAGACTTACAACATTGCAAGGAGCTTCAAACTCTACCAGAGCTTCCCTCATCATTGGAAACACTAAATTCTGCTGGCTGTGTATCACTAGAGACTGTAATGTTCCCTTCAACAGCTATTGAAAAATTGAAGGAAAACAAGAGAAGGGTTGAGTTCTGGAATTGCTTGAAATTGGATGAACATTCTCTGAGAGGTATTGAACTGAATGCACAAATTAACATGATGAGATTGGCACACCAACATGTAACCACAAGTGATCATGATTATGATGCTCAAGACATGTATGTGTATCCAGGAAGCAAAGTTCCAAAGTGGTTGGAATATAGTACAACACATGATCACTTAACTATTGATCTCTCTTCTGCTCCTTATTTCCCTCAATTAGGCTTCATTTTCTGCTTCATTATCCCAGCCATCTCATCAGAGGGTTTGATTTTGAAGTTTAAGATTAGTGATGTTGGTGAAGATGAAAGTATCAAAGTGTACTTGGACAGACCACGCCAAGGAATTGAATTGGATCATGTGTATCTAATGTACCACCAAGGATGTTCTCATTTCCTAAGTAGCAGAGCCAATGATCAGCCAAAGATTACAATTAAGGTTACAGGGGCATCACGAACACTGACATCATCATACGTGCCAGTGCAGTTAAAAGGGTTTGGGGTCAGCCTAGTAACCCCTTCAAAATATCACCAATTTATTCAGCAAATGGAATTGGGTGATAGTAGTATTTTTTCAACAATGTGTTCGGTTGAAGATGAATTTCAATATGCTAAATGA 1854 0.3819 MEYYELAKKMVDYAKGVPLVLKVLGHLLHGKVNDIKRLLKDRQYSVTMGLERLKDKTLITISQENIVSMHDLIQEMALEIVREESIEDPGRRSRLLDPEDIYEVLKYNKGSEAIRSMVVNMTIIKQLQLSPQVFDKMSNLQFLDIYAKGSHSFIHDDERGLYLPQGLESLPNELRYLRWAYYPLESLPSKFSAEKLVVLILPHSRVKKLWHQVQDLVNLNVLVLCSSTQLMELPDFSKATSLKVIDLRHCVGLTSVHPSVLPLNKLEKLDLSGCISLTSLQSNTHLSSLRSLSLCGCTALKEFSVTSENMIQLNLEHTGIKQLPSSIGLQSKLEKLHLGYTNIDNLPESIKHLTKLRHLDLQHCKELQTLPELPSSLETLNSAGCVSLETVMFPSTAIEKLKENKRRVEFWNCLKLDEHSLRGIELNAQINMMRLAHQHVTTSDHDYDAQDMYVYPGSKVPKWLEYSTTHDHLTIDLSSAPYFPQLGFIFCFIIPAISSEGLILKFKISDVGEDESIKVYLDRPRQGIELDHVYLMYHQGCSHFLSSRANDQPKITIKVTGASRTLTSSYVPVQLKGFGVSLVTPSKYHQFIQQMELGDSSIFSTMCSVEDEFQYAK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00082 617 Gene3D - 1 65 IPR042197 -
Sebi236g00082 617 SUPERFAMILY L domain-like 120 416 - -
Sebi236g00082 617 PRINTS Disease resistance protein signature 14 28 - -
Sebi236g00082 617 PRINTS Disease resistance protein signature 351 367 - -
Sebi236g00082 617 Pfam Leucine rich repeat 313 365 IPR001611 GO:0005515
Sebi236g00082 617 Gene3D Ribonuclease Inhibitor 310 440 IPR032675 -
Sebi236g00082 617 Gene3D Ribonuclease Inhibitor 104 309 IPR032675 -
Sebi236g00082 617 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 305 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00082 Sebi-Chr236 1216984 1219162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00082 33 397 WRKY Transcription Factor Family AT4G12020 37.766 1.53e-56 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00082 - - mtr:11419915 780.4