Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00077 ATGTCACCATTCATGGAGAAGGCAAATGGCAGAAGGTTGCTCAAAATGCAGGTAGGTTTGAAGCGGTGTGGAAAGAGTTGCAGACAAAGATGGTTGAATTATCTGAAGCCTGGTATCAAGAGAGGCGACATCTCTGTCGATGAAGAGGATATGATCATAAGACTTCATCGTCTTCTTGGTAACAGATGGGCTTTGATAGCAAAGAGGTTACCGGGACGAACAGACAATGAAATCAAGAACTACTGGAATACTAATCTGTCAAAGAAGTTACAGAAGCAGAAATGTGAAGAACAGAAAACCAAACACAAAAAAATCCATGTACCACCTGAGGCTCCACGGCCTAGGAGAGTTGCTCAATGCAATAAAAGAAGAATTTTGGAGAATAATGGGTGTGACTCTGATGATAGAGATCCTCCAAATAAAATAGAGGGCAATGATGAAGCTTCAATCACTGATTTCCTCATTGATATTGATCAAAACCAAATGCTGATTAATGCTGATGATTCCTCCAACTCAAAGCTCCCACAAATCAACAAGGAGAGTACTCCTACCTCATCACTTAATTCTGATCATTATTGTCACCCCTTATCAGAGAAATTTGACCCTCTGGAGACCCTTTTGGATGTGGAGCTCAAGAAGATGGCTTCCTTTCTTGGACTAGAAAGTAATTGA 672 0.4077 MSPFMEKANGRRLLKMQVGLKRCGKSCRQRWLNYLKPGIKRGDISVDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSKKLQKQKCEEQKTKHKKIHVPPEAPRPRRVAQCNKRRILENNGCDSDDRDPPNKIEGNDEASITDFLIDIDQNQMLINADDSSNSKLPQINKESTPTSSLNSDHYCHPLSEKFDPLETLLDVELKKMASFLGLESN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00077 223 MobiDBLite consensus disorder prediction 123 145 - -
Sebi236g00077 223 FunFam Transcription factor TT2 44 111 - -
Sebi236g00077 223 MobiDBLite consensus disorder prediction 97 116 - -
Sebi236g00077 223 CDD SANT 45 86 IPR001005 -
Sebi236g00077 223 MobiDBLite consensus disorder prediction 123 143 - -
Sebi236g00077 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 90 IPR017930 -
Sebi236g00077 223 SUPERFAMILY Homeodomain-like 21 95 IPR009057 -
Sebi236g00077 223 MobiDBLite consensus disorder prediction 166 190 - -
Sebi236g00077 223 ProSiteProfiles Myb-like domain profile. 36 86 IPR001005 -
Sebi236g00077 223 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 11 114 - -
Sebi236g00077 223 Gene3D - 44 108 - -
Sebi236g00077 223 SMART sant 40 88 IPR001005 -
Sebi236g00077 223 Gene3D - 6 40 - -
Sebi236g00077 223 Pfam Myb-like DNA-binding domain 42 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00077 Sebi-Chr236 1100609 1101543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00077 1 110 MYB Transcription Factor Family AT3G13540 59.649 9.53e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi236g00077 Myb_DNA-binding 2.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00077 K09422 - gmx:547568 237.269