Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00076 ATGGGAAGAAGTCCTTGTTGTTCTAAGGAAGGCTTGAACAAAGGAGCATGGACAGCCACTGAAGACAAAATTCTCACAGAATACATTAAGATTCATGGCGAAGGAAAATGGAGACACCTTCCTAAAAGAGCAGGTCTCAAAAGATGTGGGAAAAGTTGCAGGCTAAGATGGTTGAATTATCTAAGACCTGGCATTAAAAGAGGAAATATTACTAATGATGAAGAGGAACTTATAATCAGGCTTCACAACCTTCTTGGAAACAGGTGGTCCTTGATTGCTGGACGGCTTCCAGGACGAACAGACAATGAAATAAAGAACTATTGGAACACCAACATTGGAAGGAAGCTTCAAAATAATGGAACCATTAATATTGCAAGTGGTGCACGAAACTCCTCAGTTGAACAACGGAACATGAAACAAAGTACACAAGATCAGTGGCACTATACACAAAATAATAAGGGTTCTTCAGCTTGTTATGTGGTCCAGACAAAAGCAACAAGGTGGAGTTCTAAGACCACAATCATCACTCAACAAAATGAAGGGATAGACCTTGATAACAAATTAATGAAGGGAGAATCACCACCAGTGTCTTCACCTTCAGACAATAACAACAATGTCAATGTCAATGCCAATGTTGACCCTTTGGATTTCATGGCAGATTTTGAGATGGATGGCAATTTCTTTTCGGAGCTTCTCAAGATGGATATACCTAATTCAGAACCATCTTGTTTGGAAAATAAGATACACAAGATGGAAGATCATCATAATGGTGGTAACCCTAGCACACTTGACAAAGGTCATTTATCTCCAAAATCTTACAATGATACTCCCAGCTGCCCCTTCCTTTGGGCTGATTCATTTTCATATGATACAGGTTTTTAG 882 0.3934 MGRSPCCSKEGLNKGAWTATEDKILTEYIKIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPGIKRGNITNDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRKLQNNGTINIASGARNSSVEQRNMKQSTQDQWHYTQNNKGSSACYVVQTKATRWSSKTTIITQQNEGIDLDNKLMKGESPPVSSPSDNNNNVNVNANVDPLDFMADFEMDGNFFSELLKMDIPNSEPSCLENKIHKMEDHHNGGNPSTLDKGHLSPKSYNDTPSCPFLWADSFSYDTGF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00076 293 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi236g00076 293 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Sebi236g00076 293 FunFam MYB-related transcription factor 13 66 - -
Sebi236g00076 293 Gene3D - 14 66 - -
Sebi236g00076 293 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi236g00076 293 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Sebi236g00076 293 CDD SANT 16 61 IPR001005 -
Sebi236g00076 293 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sebi236g00076 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sebi236g00076 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sebi236g00076 293 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 192 - -
Sebi236g00076 293 CDD SANT 71 112 IPR001005 -
Sebi236g00076 293 Gene3D - 69 153 - -
Sebi236g00076 293 SMART sant 13 63 IPR001005 -
Sebi236g00076 293 SMART sant 66 114 IPR001005 -
Sebi236g00076 293 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00076 Sebi-Chr236 1060231 1061819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00076 1 120 MYB Transcription Factor Family AT2G16720 75.000 1.25e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi236g00076 Myb_DNA-binding 5.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00076 K09422 - gmx:100809225 350.903