Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00072 ATGATGAGTGCAAATGCAAGAAATAGGTCCCCTTTCACAGCAATTCAGTGGCAAGAACTTGAACAACAAGCTCTTGTTTTCAAATACATGGTTACAGGAACACCTATTCCACCAGATCTCATCTACTCTATCAAAAGAAGTCTAGACACTTCAATGTCTTCAAGGCTCTTCCCACATCATCCAATTGGGTGGGGATGTTTTGAAATGGGTTTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGACTCCAAGTACTGTGAAAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCATCAACAAGCACCGCCACAAACACCTCCCAAACAAACCCATCCTCTTATAACAGAAACCTTTCCTTGACCAACCCCAACATAACTCCACCCTCTTCTTTCCCTTTCTCTCCACTCCCCTACCCCCTGATTCTGATTTTCCCACCTCAAGATGCCACAACCCACCAGCTATTTATGGACTCTGGGTCTTATTCTCAGGAAGACAAGGATTATAGGCATGTACATGGAATAAGGGAGGGTGTGGATGAGAGAGCTTTCTTCCCTGAAGCTTCAGGGTCTTCTAGGAGCTATCCTGACTCATATCAGCAGCTATCAATGAGCTCTACAAGCCCTATTCAAACTCCCATTTTCAGGACATCAATGATAACCAAGACAGCAAGAGCAGCACTGCTTTGTTTTGGGGACTGA 771 0.4501 MMSANARNRSPFTAIQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDTSMSSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSSTSTATNTSQTNPSSYNRNLSLTNPNITPPSSFPFSPLPYPLILIFPPQDATTHQLFMDSGSYSQEDKDYRHVHGIREGVDERAFFPEASGSSRSYPDSYQQLSMSSTSPIQTPIFRTSMITKTARAALLCFGD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00072 256 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi236g00072 256 MobiDBLite consensus disorder prediction 103 145 - -
Sebi236g00072 256 PANTHER GROWTH-REGULATING FACTOR 5 10 229 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sebi236g00072 256 MobiDBLite consensus disorder prediction 117 145 - -
Sebi236g00072 256 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi236g00072 256 Pfam WRC 77 119 IPR014977 -
Sebi236g00072 256 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Sebi236g00072 256 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00072 Sebi-Chr236 984225 985302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00072 9 221 GRF Transcription Factor Family AT3G13960 46.768 1.67e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sebi236g00072 WRC 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00072 - - gmx:100806024 386.726