Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00060 ATGATGATGCAGATTTTTCCACCTAGATGGCGGAGCTTTTGGGACAAATGGGAGCTCCGTTTTGTGGTTCTGTTTAGCCTCAGCATCCAAATCATCCTCATCCTTCTTGGCAACAAGAGAAAGTACTGCACCAGAAGCTGGCTCAGATTCACACTGTGGTCTGCCTACTTGTTGGCAGACTGGCTTGCAACAACCTCACTTGGTGCTCTTTCAAATAAAGAGGGAGAAAATAAAGGTGGTTTTGTGGAGCCAATGTATGTCATTGTGGCTTTGTGGGCTCCACTCCTTCTCCTTCACCTTGGTGGCCCAGATACCATCACTGCTTACTCAATGGAAGACAATGCACTTTGGAGTAGGCGTTTGTTAAGTTATTCTATCCAGGTGGTGGTGGCACTTTATATCTTCCTTAGATCCTGGACAAATACTGATCTCAACATTTTGGCAATACCAATTTTCATTGCTGGTATTATCAAAATTGGTGAGAGGATTTGGGTTTTGTGGTCTGCAAGCAGCCAACAATTCAAAGAGTCCTTGTTTCCTGACCCTGATCCAGGGCCTAATTATGCCAGATACATGGAAACATACAATTCAGCTTCTTATGAAGGGTTCAGAGTTGAAGTAGAAGGCCTCATTGAAACTCCCTCAGCTGGTGGTGATCATAACTATGCAGCTGCAGAAGGCAACATTATCCCATTACCACAAACTGATACATATGGACCTGCAACAACTGTAAAGATTGCACATAAATTCTTGAAGATTTCCAAGCTGCTGTTTGCAGATCTCATCCTGAGCTTCCAAGATGTTTCAGAAAGCAGATCATCTTTAATGAATGGAAATGGCAAGGATGTGTTTGAAGTGATGGAAGTTGAGCTTGGATTTATGTATGATCTGTTCTACACAAAGGCAGCTGCAATTTATTCTTTCATGGGTTGTGTTCTCCGTTTTGTCACTTTATCTTGCAATATAAGTGTGCTGTGTGCCTTCTTTTCCATGGAGAAGAATCAATATCCAAAAGTGGATGTGTTCATCACAGGTGTGTTGCTGCTTGGAGCTATCATCCTAGAGATATATTCAGTAATTTTATTATTGTCCTCAGACTGGACAATGCTGTGGCTGAGTAAGCACAAGAACAGGGTTACTAGTAAGGCCATTTCATTAATCCAATTTGTCAAGAGAAAGAGGTGGTCAAACAGCATTGGTCAGTTCAACCTCATAAGCTTTTGCTTATTACAAGCTAGAAAACAAAAATGCAGAATCCCCTGCTTCAAAGTTGGCCTCAAGTGTTGTCTTGCTAGAATGATTATTGGTGTTTGGCAGTCCTATCAGAAGTACAAGCACAGTGATTTCGAAATTGTCACTCCTGATCTGAAGGAAATTATCTTTCAGCATTTTATAAATAAAATAAAAGAGGTCAACAAGGAAGAAAGGGTCAAGGATGAGGAGTTGGCTAAAGATATCACTGGATTTTGTAATGACAAGGGGGCCAAAGTGCTGGAAAGCTTTAAATATTCAAATAAATTAGGGTGGAGCGTGGGAGTAGAATTTGATCAAAGCATTCTTCTGTGGCATGTTGCAACAGATATATGTTATAATTCTGTCTCAGTTGAAGAAGACACGAATAATGGCAGGAGTTTAACTCCTAGAGAAGCAAGCAAATTGTTATCAGAATATATGGTGTATCTTCTTGTTATGAGACCATCCATGATGCCTAATGGGATTGGTGAGATAAGGTTCCAAGACACATGTGCTGAGGCAACTGAATTTGTTGAGGACAGATATTCCATAAAATGGGAGAAGGAAGTATGTCAGAAGCTACTCAAAGTCAGCAGTGAGATTGAGAAGGTTAAACCTTTAAAGGTGAAAGGAGATAGAAGCAAGTCTGTACTATTTGATGCATGCAGGTTGGCTAAACAAATAAGAGAGCTAAGTGATGATGAAGACTGGGAGACAAAAAAGATGTGGGAGTTAATATCTCAAGTGTGGGTTGAAATGCTTGGTTATGCTGCTAGCCACTGTCAGGGAATTCATCATGCTCAGGAGCTCAGACATGGTGGAGAACTACTCACACATGGGAGGTACAGAAACAAGTGGCAGCCACCGGTGATCGTCTTCTGTTCTGTGAGAAACACTTCCGTTTTCCTTCAGCAACGAAAAGAGTTAGAGAGCAACATGAATTGGGTTGAGTTACTTTTCTGGATTGCATTGACTGCAATATTGTTTGTTTCTGTGGCCCTTGATTGTCTTGTCATTTTCTATGAAGATAAAGTTAAATGGATAAAGAGAAAATTGGAGTTACTAGAAGCTCTGACAAAGGATTATGATCAACTTGTGAAGAAACGGGACGAAGTAGAATCAGGAGTCCGTCATCTCTGGGAATTAGAAGACCTATCTGGTGGAATTCATCTGCAGCTAAGTGGAACTGAGAATGAATGGGTAAAATCAACAGGAGAAGTGGTTAGTAAAGCAAAACGTTGTGTCGCCAGGTACGAAAGACATTCCCTCGGACCGCTTCTTGGTATTATTACAGCTATCTTTAGATCGATGCCCATTATATCTGTTATCTGTGAAATAGAATCTGTCAAAAGGGAGATGAGAGATCATTTACAAAAGAAAGATGAGAAGGCCAAGGAAATCTCTAAATCTATGGAGAATTCAAGATCTCTGCTGGATCAATATAAATATATAATTGAAGAGGCCGATAAATCTGTAGCAGCTCAAAACCAAAAGCAGAAGCAGCCTTCTACAAGTTTTGAAGAATTGATGAAGAAGGGCGAACACATATTTTCCACAATGGAAGAGAGAAGGTCTATATATCTACTGCTTCCACTGCATGCTTTCGTGAAGGATTTGAGTCAGCTTCAGTTAGAAACTGAAACAGAAAAGCTCTGGAAAAAAGAAGCGGAAGAAGTAATTGAAGATGCAGAGACCCTTATTAACAACTACTTATGGTGGTTTGACTGGTTTCCAATTTTTAGCATATTGAAGAAATTCAAGATGCCTATTCTCATTGTTACGCATCAATTCAGAAAGGGAATGAGGCGCATTGTCACTGAGTTTGATGGCCTGCTTAAGAGGAAGGAGAAGTATAATTTAGCTTTTATTGATAGAGCTGCAGAAAAGTCAATCTTCCCATCTATTATAGATGACAAAGAAATCACACCAGCCATGAAAAGCATCCACAGCAAGCTGAACAATCTGCAGAAAAGCTCAAAGCGTGAACCTGAAATGAACTCAGTCTGTCATGCATTGGAAGAAATGTATAAGCAGCTTCAGAAAGCAGAAGAAACAGCTGGGAGAAATGCTTGTGTAGAGCAACTAAAGTCCATTGCTCAGGAGGTGGACAATTTACTAGAAAGGTACATGAATGAACCTGAGCTCAAACGTCAAGAGATCAAAAATGCTACTGATCTTCTTCAGAAAATAATAAGAATTTGCAGCATCAAAAGACAGAAATCAACCAAAGTAGTTGGTTTGAAAAATGAAGTACGAGATTTGGTCTCCAAGCTGACAACAAGCAGTGACAATCCTTCGACACTTTCCATTGTAGGGATGAAAGGTGTGGGGAAGACAACTCTGGCAAAGGCAGTTTATTACAAAAAAGCTGTTGTCGAGCACTTCCCTATCCGTGTCTGGGTGACAGTAACTGAAGGAGCAGCAACCAGAGCACAAGTTCTGCTGATGGACAAGCATGGGACTAAAGACCAGACATTGGATGTCACTCAGGTAAGAGATCACTTGAAAGAGAAGCTATGCCTCGTTGTTTTAGATAATGTCTCCAAAACAGAAGATTTTGACAAACTAGATGAAACATTATCTGGATCTGGATGGACAAATGGGAGCAGGATAGTGCTGACAACACGCTCTAAGAATGTGGCTTCGCATGCTGACAGTAGTAGCACCCTTCACCACATTCACATTCGACTACTAACTATGGAAGAGAGTTGGGCGTTGTTTGTGAAAGTGGCTGGCTTTGAAAAGAAAGTATTAGAACCAAAAGTGGAAAAATTTGCAAGAAAGGTAGTAGGAAGATGTGGGGGGTTACCACATGAAATCTTATCTCTTGGGTGTGTCATGCCAGCGAAGGATATAACTCAAGAGAACAACCGATCGTGGGTGCTTTCTCGAATCAATCATGGCCGTCACAGAGAACATTGGCAGCAGGCTTGGGAAAAGAACAGAGAAGAACTAATGAGAGGAACTCTGATTGAATATCTCAATTACTTCACACACTTCCCTGTAGACTTTGAAATCCCAGCGAGGAGATTAGTCAATCTATGGGTTGCAGAAGGACTGGTGCAACAAAACGACCAACAAACACCCGAAGACACTGCAGAAGGGTATCTAAAAGAGTTGAGAGACCGCAACATGATTCAAGTAGTGGCACTAAAGTCCAATGCGAAGATTAAGACATGTCGTTTACCAAGCATACTTAGACAAATCATCTTGCAACATGACAGAACAAGCCACAACCAGCACTTGGGGACACATTTAGAGCGGCGATTTGCCTATCATTTTGATGTTCATGGTCTTGATGCAAATTCAACACAAGTATTAAGCAAAAAAGGAATTCCCGTATCAGTTTTTTTCTTTGACAAGCGAGAGGGGAGTAAACCAGGAGAACAAGTAGGGAAGATCCTTTCAACAGGCATTGTAAGTGAGCAGTTCCTGGAGATCAAAGTTCTTGATCTTGAACGCGTATTCAGACCTCAGCTGCCTGAGTCTTTAGGTAAGTTAACTAATATCAAGTATCTTAGCTTAAGGTGGACTTACTTGGAGGAATTCCCCCTCTGCATATGCAAACTTATGGAGCTGGAAACACTGGATTTAAAGCATACATGTATCCGTGTCATCCCTAGCTCCATCTGGAAATTGAAGAAGCTGAAGAACTTATATCTGATCCAAAAATATCGAAGTAGACTTGAGGGCAAGCCAAGTGGAAAGTTTGAAGAAAATCTACACACGCTATGGGGTGTGTTCTTGTATGGGAGTTACCCTCTTCTTCGTTACCTCCACAAGCTGAAGAACCTTCAAAAATTAAAATTAGCTTTCCAGTTGACAGAATTAGAGCAAGACACAGTTGCCTCCAAGATTGTGCAGCTGAAACAGCTTAATTCACTGAGACTTAGATCAATAGATGAAGATGATAAACTACGCATGAGCCGCCTCCCACAAAATCTCATTGATCTCACTTTGTCAGCTTCAAAACTGTCAGATGATCCCATGACAGAGTTGCAGAACCTGCCCGAGCTAAAGTCCTTGTGTCTATATGCTGACTCTTATACAGGGATAAAGATGGTTTGTGCCTCAGGCAGCTTTCGAAAACTTCAAGTGCTGAGATTCTGGAAGTTATGGAACCTGCAAGAATGGGATGTAAAGGATGGAGCGATGCCTAGCCTCGTCGAGTTTGAAGCCCGGTTCTGCGGAAATTTGGAATATCCCACTGGGTTGAAGCATTTGAAAGCTCTTCGCATGGTAAAGTTACATGAAATGTCAGGTCAATTCATCAGGGAAATTAAGAGGACTTTATCCATTGACGTTGAGATTGATTTTGATTGA 5556 0.4107 MMMQIFPPRWRSFWDKWELRFVVLFSLSIQIILILLGNKRKYCTRSWLRFTLWSAYLLADWLATTSLGALSNKEGENKGGFVEPMYVIVALWAPLLLLHLGGPDTITAYSMEDNALWSRRLLSYSIQVVVALYIFLRSWTNTDLNILAIPIFIAGIIKIGERIWVLWSASSQQFKESLFPDPDPGPNYARYMETYNSASYEGFRVEVEGLIETPSAGGDHNYAAAEGNIIPLPQTDTYGPATTVKIAHKFLKISKLLFADLILSFQDVSESRSSLMNGNGKDVFEVMEVELGFMYDLFYTKAAAIYSFMGCVLRFVTLSCNISVLCAFFSMEKNQYPKVDVFITGVLLLGAIILEIYSVILLLSSDWTMLWLSKHKNRVTSKAISLIQFVKRKRWSNSIGQFNLISFCLLQARKQKCRIPCFKVGLKCCLARMIIGVWQSYQKYKHSDFEIVTPDLKEIIFQHFINKIKEVNKEERVKDEELAKDITGFCNDKGAKVLESFKYSNKLGWSVGVEFDQSILLWHVATDICYNSVSVEEDTNNGRSLTPREASKLLSEYMVYLLVMRPSMMPNGIGEIRFQDTCAEATEFVEDRYSIKWEKEVCQKLLKVSSEIEKVKPLKVKGDRSKSVLFDACRLAKQIRELSDDEDWETKKMWELISQVWVEMLGYAASHCQGIHHAQELRHGGELLTHGRYRNKWQPPVIVFCSVRNTSVFLQQRKELESNMNWVELLFWIALTAILFVSVALDCLVIFYEDKVKWIKRKLELLEALTKDYDQLVKKRDEVESGVRHLWELEDLSGGIHLQLSGTENEWVKSTGEVVSKAKRCVARYERHSLGPLLGIITAIFRSMPIISVICEIESVKREMRDHLQKKDEKAKEISKSMENSRSLLDQYKYIIEEADKSVAAQNQKQKQPSTSFEELMKKGEHIFSTMEERRSIYLLLPLHAFVKDLSQLQLETETEKLWKKEAEEVIEDAETLINNYLWWFDWFPIFSILKKFKMPILIVTHQFRKGMRRIVTEFDGLLKRKEKYNLAFIDRAAEKSIFPSIIDDKEITPAMKSIHSKLNNLQKSSKREPEMNSVCHALEEMYKQLQKAEETAGRNACVEQLKSIAQEVDNLLERYMNEPELKRQEIKNATDLLQKIIRICSIKRQKSTKVVGLKNEVRDLVSKLTTSSDNPSTLSIVGMKGVGKTTLAKAVYYKKAVVEHFPIRVWVTVTEGAATRAQVLLMDKHGTKDQTLDVTQVRDHLKEKLCLVVLDNVSKTEDFDKLDETLSGSGWTNGSRIVLTTRSKNVASHADSSSTLHHIHIRLLTMEESWALFVKVAGFEKKVLEPKVEKFARKVVGRCGGLPHEILSLGCVMPAKDITQENNRSWVLSRINHGRHREHWQQAWEKNREELMRGTLIEYLNYFTHFPVDFEIPARRLVNLWVAEGLVQQNDQQTPEDTAEGYLKELRDRNMIQVVALKSNAKIKTCRLPSILRQIILQHDRTSHNQHLGTHLERRFAYHFDVHGLDANSTQVLSKKGIPVSVFFFDKREGSKPGEQVGKILSTGIVSEQFLEIKVLDLERVFRPQLPESLGKLTNIKYLSLRWTYLEEFPLCICKLMELETLDLKHTCIRVIPSSIWKLKKLKNLYLIQKYRSRLEGKPSGKFEENLHTLWGVFLYGSYPLLRYLHKLKNLQKLKLAFQLTELEQDTVASKIVQLKQLNSLRLRSIDEDDKLRMSRLPQNLIDLTLSASKLSDDPMTELQNLPELKSLCLYADSYTGIKMVCASGSFRKLQVLRFWKLWNLQEWDVKDGAMPSLVEFEARFCGNLEYPTGLKHLKALRMVKLHEMSGQFIREIKRTLSIDVEIDFD 1851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00060 1851 SMART AAA_5 1175 1310 IPR003593 GO:0016887
Sebi236g00060 1851 Coils Coil 857 877 - -
Sebi236g00060 1851 Coils Coil 1103 1123 - -
Sebi236g00060 1851 Gene3D - 1400 1484 IPR036388 -
Sebi236g00060 1851 Pfam Domain of unknown function (DUF4220) 53 406 IPR025315 -
Sebi236g00060 1851 Coils Coil 759 786 - -
Sebi236g00060 1851 Pfam Protein of unknown function, DUF594 648 690 IPR007658 -
Sebi236g00060 1851 Pfam NB-ARC domain 1160 1369 IPR002182 GO:0043531
Sebi236g00060 1851 Gene3D - 1308 1399 IPR042197 -
Sebi236g00060 1851 PRINTS Disease resistance protein signature 1178 1193 - -
Sebi236g00060 1851 PRINTS Disease resistance protein signature 1599 1615 - -
Sebi236g00060 1851 PRINTS Disease resistance protein signature 1245 1259 - -
Sebi236g00060 1851 PRINTS Disease resistance protein signature 1344 1358 - -
Sebi236g00060 1851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1150 1363 IPR027417 -
Sebi236g00060 1851 Gene3D - 1131 1303 IPR027417 -
Sebi236g00060 1851 Gene3D Ribonuclease Inhibitor 1540 1843 IPR032675 -
Sebi236g00060 1851 PANTHER OS01G0798800 PROTEIN-RELATED 17 690 - -
Sebi236g00060 1851 SUPERFAMILY L domain-like 1554 1831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00060 Sebi-Chr236 829034 838268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00060 1132 1291 WRKY Transcription Factor Family AT4G12020 28.161 5.21e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00060 - - tpra:123886737 1391.71