Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00059 ATGTCTACCATTGAGTTATTATTCTGGTTTGTAATAATTGTGGTGTTGGCTGTTTCTCTGATCCTTGATTGTTTGCTCATCTACTATGAAGATAAAGTTAAGTCGATAGAGAAAAAATCTAAGTTACTAGAAGCTCTGATAACGGATTATGATCAACTTGAGAAGGAGCGGGGAAATTTAGAATCAGTAGTCCGTTATTTGTGGGACTTAGAAGACTTATCTGGAATTCATCTGCAGCTAAGTGAAACGGAGAATGAATGGGTAAAAACAACAAGAGAAGTGGTTAATGAAGCAAAATCCTGTGTCTCCGAGTACAACAGACAAAGCCGAGGATTAATTCGTGGCTGTACGACGGCTATCTTTAGATTGATACCCATTATAGTTGTTCTCTATCAAATAGAAACTTTAAAAAATAAGATGAAAGAGCATTTTAAAGAGAAAGATGAGAAAGCCAAGGACATATGTAGATCCATGGAGAGGTCAAGATCTCGGAATAGAAGTTTGCTGGATCAATATACAATTGAAGAAGAGGCCGATAAATCCGTAGCAGCTCAAAACCAGAAGCAGAAGAAGCGTTCAAAAAGTTTAGATGAATTGATGGAGAAGAGCAAAGACCTATTTTCTAGCATGGAAGAGAGATGGTCTATAAATCTTCTGCTTCCACTGTATGCTTTCATGAAGGATTTGAGTCAGCTTCAGTTAGAAACTGAAACAGAAAAGTTCTGGAAAACAGAAGCGGAAAAAATAATTGAAGACGCAGAGGACTACATTAGCAGTTACTCACGGTGGTTTCAAAAAAGAAATAGAGAGGGCATGAAGCGCATTGTCACTGAATTTGATGGCCTGCTTACGAGGAAGGAAAAGTATAATTTTGATTTCTTTGATAGAGCTGCAGAAAAGTCAAGCTTCCTATATACTGCAGATGAAAAAGAAATCACCTCAGCGATTAAAAGCATCAACAACAAGCTGAACAAGCTGGACAAAAGCTCAAAGCAGGTAGCTGAGATGAACTCACTGTATGATACATTGGAAGAAACGCATAGTAAGCTTCAGGAAGCAGAAGAAACAGCAGTAAAAAACGCTTGTTCAGAGCAACTAAAGTCCATTGCTCAAGAGGTGGACAAATTTCTAGAAAGCTATATTAACGGACCTGAGCATAAACGTCATGAGATCACAAAAGCTAGTAAACTTCTACAGAAGATAATAAAAATTTGCAGCATCGAAAGACAGAAGTCAGCAAAAATAGTTGGTTTGAAAAATGAAGTGCGAGATTTGGTCTTGAAGCTGACCACAAGCAGTGATAATCCTTCGAAACTTTCCATTGTGGGGATGAAAGGTGTGGGGAAGACAACTCTGGCAAAGGCAGTTTATTACAACAAAGCTGTGGTCGAGCACTTCCCTATCCGTGTCTGGGTGAAAGTAACTGAGGGAGCTGCCTACAAAGCACAAGTTCTGCTGATGAAAAAGGATGGGTTTAAAGACCAGACGTTGTATGTCACTCAGGTTCGTGATCACTTGAAAGACAAGCTATGCCTTGTTGTTCTAGATAATGTTTCAAAAACAGAAGATTTTGATAAACTAAATGGAATATTATCTGGATCTGGAATGACAAATGGGAGCAGAATAGTGCTGACAACACGCTTTAAGAATGTGGCTTTGCATGCTGACGGTAGTAGCACCCCTCACCAAATTCGACTACTAACAAAGGAAGAGAGTTGGGCGCTGTTTCAGAAGGTGACCAACATTGAAAAATTAGATTCAAATATGGAAAATTTTGCTAAAAAGGTAGTGGGAAGATGTGGGGGCTTACCACTTGCAATCTTATCTCTTGGGTGTGTCATGTTAGCTAAGGGTATAACTCTAAAGAACTTATCATGGGTGTTTAATCGAATCAATCAAGGCCAATACAGAGCACATTGGCAGCGAGCTTGGGAAAGCACCAAACAAGAACTGAGTGAAACTATGAGTAGCTGTCTCCATTACTTCACACACTTTCCCGTAGACTTTGAAATCCCAGCGAGGAGATTAATCAATCTATGGGTTGCAGAAGGGTTGGTGCAACAAAACAAGCAAGAAACACCTGAAGACGCTGCAGAAAGGTGTTTGGAAGATTTGAGAGACCGCAACATGATTCAAGTAGTGGCACTAAAGTCCAATGCGAAGATTAAGACATGTCGTTTACCAAGCATGCTTAGACAAATCATCTTGCACAACGAGGGAACAAGCCACAGCCAGCACTTGGGGACACATTTAGAGAGGCGATTTGCCTATCATTTTGATGATCATGGTCTTGATGCAAATTCAACACAAGTATTAAGCAAAAAAGGAATTCCCGTATCAGTTTTTTTCTTTGACAAGCGAGAGGGAAGTAAACCAGGAGAACAAGTAGGGAAGATCCTTTCAACAGGCATTGTAAGTGAGCAGTTCCTGGAGATCAAAGTTCTTGATCTTGAACGCGTATTCAGACCTCAGCTGCCTGAGTCTTTAGGTAAGTTAACTAATATCAAGTATCTTAGCTTAAGGTGGACTTACTTGGAGGAATTCCCCCTCTGCATATGCAAACTTATGGAGCTGGAAACACTGGATTTAAAGCATACATGTATCCGTGTCATCCCTAGCTCCATCTGGAAATTGAAGAAGCTGAAGAACTTATATCTGATCCAAAAATATCGAAGTAGACTTGAGGGCAAGCCAAGTGGAAAGTTTGAAGAAAATCTACACACGCTATGGGGTGTGTTCTTGTATGGGAGTTACCCTCTTCTTCGTTACCTCCACAAGCTGAAGAACCTTCAAAAATTAAAATTAGCTTTCCAGTTGACAGAATTAGAGCAAGACACAGTTGCCTCCAAGATTGTGCAGCTGAAACAGCTTCAATCACTGAGACTTAGATCAATAAATGAAGATGGTGATCCTAAAATCCTAAAATTGAATAATATGTCAAACCTGGAGAAGCTCTCATCCCTTCAGTTGTTTGGGATGTTAGAAGATAAACTAGGCATGAGCCGCCTCCCACAAAATCTCACTGATCTCACCTTGTCAGCTTCACAACTGCCAAATGATCCTATGACAGAGTTGCAGAACCTGCCCAAGCTCAAGTCGTTGAGTTTTTATGCTGACTCATATACAGGGAAAAAGATGGTTTGTGCCTCAGGCAGCTTTCTACAACTTCAAGTGCTAAGATTTTGGAAGTTAGGGAACCTGGAAGAATGGGATGTTATGGAAGGAGCGATGCCTAGCCTTGTGGAGTTTGAAGTCCGGTCCTGCAGAAATTTGGCATGTCCCACTGGGTTGAAACATTTAAAAGCTCTTCGCATGATAAAGTTACATGAAATGCCAAGTCCATTCAGCAGAGAAATCGAGACGTTATTGAATGACGTTGAGATTGATTCTAAAGATCATCAAGGGACACCCACTCCAGAGGAAAGCTTTTAA 3432 0.4036 MSTIELLFWFVIIVVLAVSLILDCLLIYYEDKVKSIEKKSKLLEALITDYDQLEKERGNLESVVRYLWDLEDLSGIHLQLSETENEWVKTTREVVNEAKSCVSEYNRQSRGLIRGCTTAIFRLIPIIVVLYQIETLKNKMKEHFKEKDEKAKDICRSMERSRSRNRSLLDQYTIEEEADKSVAAQNQKQKKRSKSLDELMEKSKDLFSSMEERWSINLLLPLYAFMKDLSQLQLETETEKFWKTEAEKIIEDAEDYISSYSRWFQKRNREGMKRIVTEFDGLLTRKEKYNFDFFDRAAEKSSFLYTADEKEITSAIKSINNKLNKLDKSSKQVAEMNSLYDTLEETHSKLQEAEETAVKNACSEQLKSIAQEVDKFLESYINGPEHKRHEITKASKLLQKIIKICSIERQKSAKIVGLKNEVRDLVLKLTTSSDNPSKLSIVGMKGVGKTTLAKAVYYNKAVVEHFPIRVWVKVTEGAAYKAQVLLMKKDGFKDQTLYVTQVRDHLKDKLCLVVLDNVSKTEDFDKLNGILSGSGMTNGSRIVLTTRFKNVALHADGSSTPHQIRLLTKEESWALFQKVTNIEKLDSNMENFAKKVVGRCGGLPLAILSLGCVMLAKGITLKNLSWVFNRINQGQYRAHWQRAWESTKQELSETMSSCLHYFTHFPVDFEIPARRLINLWVAEGLVQQNKQETPEDAAERCLEDLRDRNMIQVVALKSNAKIKTCRLPSMLRQIILHNEGTSHSQHLGTHLERRFAYHFDDHGLDANSTQVLSKKGIPVSVFFFDKREGSKPGEQVGKILSTGIVSEQFLEIKVLDLERVFRPQLPESLGKLTNIKYLSLRWTYLEEFPLCICKLMELETLDLKHTCIRVIPSSIWKLKKLKNLYLIQKYRSRLEGKPSGKFEENLHTLWGVFLYGSYPLLRYLHKLKNLQKLKLAFQLTELEQDTVASKIVQLKQLQSLRLRSINEDGDPKILKLNNMSNLEKLSSLQLFGMLEDKLGMSRLPQNLTDLTLSASQLPNDPMTELQNLPKLKSLSFYADSYTGKKMVCASGSFLQLQVLRFWKLGNLEEWDVMEGAMPSLVEFEVRSCRNLACPTGLKHLKALRMIKLHEMPSPFSREIETLLNDVEIDSKDHQGTPTPEESF 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00059 1143 Gene3D - 392 562 IPR027417 -
Sebi236g00059 1143 Pfam NB-ARC domain 421 658 IPR002182 GO:0043531
Sebi236g00059 1143 Coils Coil 133 153 - -
Sebi236g00059 1143 Coils Coil 36 63 - -
Sebi236g00059 1143 PANTHER DISEASE RESISTANCE PROTEIN RP 245 1080 IPR044974 GO:0006952
Sebi236g00059 1143 Coils Coil 326 356 - -
Sebi236g00059 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 661 IPR027417 -
Sebi236g00059 1143 SUPERFAMILY L domain-like 808 1128 - -
Sebi236g00059 1143 PRINTS Disease resistance protein signature 1075 1091 - -
Sebi236g00059 1143 PRINTS Disease resistance protein signature 505 519 - -
Sebi236g00059 1143 PRINTS Disease resistance protein signature 438 453 - -
Sebi236g00059 1143 PRINTS Disease resistance protein signature 600 614 - -
Sebi236g00059 1143 Gene3D - 645 738 IPR036388 -
Sebi236g00059 1143 Gene3D Ribonuclease Inhibitor 787 910 IPR032675 -
Sebi236g00059 1143 Gene3D Ribonuclease Inhibitor 919 1123 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00059 Sebi-Chr236 821239 824670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00059 439 617 WRKY Transcription Factor Family AT5G45050 27.568 1.22e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00059 - - tpra:123886737 1429.46