Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00057 ATGACCATGGAACCAAACCCAACATCAGATCACATTCTAGACTGGCTTGAAGGTTCTGTCTCTTTCTTCCCATCATTCTTGGATGATCCATATAATAACTCTGCTTACATCCAAGAGTATCAGTTGTGGGATCAGGGCCAAGACATAAGTAGCCAGTACCAAACTGATGCCAATACAGGTTCTCCTTCTCCTAATGCCACCAACAGCACTACCACCATTGTTGCTGCTGCTAGTACCACCAGCACAACATCCCTTGAGCCTTATGGTTCCATCAACCTACCACTTTCTGATTTGCCCAAGAAACGAAATGCCACTGATGAATCAAGTCTCAAACCATCACAAAGCCACAAGCACAAAAGAATCAAGAGCCGTCCAATGAATGAAGCTGACAATGGAGATGCAGCTGTTGAAGGGACAGTGGTTAGAAAATCTGGTGGGAACAAGAAAGGTGCAGCTAAGGCCAATGGAAATAACTGTAACAGTGGAAACAACAAGGAAGGTAGGTGGGCTGAGCAGTTGCTTAACCCTTGTGCTGCAGCCATAGCTGGTGGAAACTTGAATCGTGTACAACATCTCTTATATGTTCTCCATGAGCTAGCCTCGCCTACTGGTGATGCTAACCACAGGCTTGCAGCCTATGGTCTCCGAGCACTGACAAACCATCTATCATCTTCTTCATCAGCTACCTCTTCAGGGTCTATAACTTTTGCATCTACAGAACCAAGGTTCTTTCAAAGGTCACTATTGAAGTTCTATGAGGTTAGCCCCTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATCCTTCAAGTTCTTGCTGAAGAACCAAATAGTTCACGTACCCTTCACATCCTTGACATTGGGGTCTCTCATGGTGTTCAATGGCCAACTTTTCTAGAAGCCTTGAGTCGTAGACCTGGTGGACCTCCTCCTCTAGTTCGCCTCACTGTGGTTCCTGCTTCCTCCTCCACTGAAAATGGCCAAAACATGGAGACCCCATTTTCAATAGGTCCACCTGGTGATAACTTCTCTTCTAGACTCCTTGGTTTTGCTCAGTCCATGAATGTCAATTTGCAGATAAACAGGCTCGATAATCAGTCACTGCAGACATTAAATGCTGAAATTATTGACACCTCCCCAGATGAAACTTTTATTGTCTGTGCACAGTTTAGGCTGCACCACTTGAATCATAACACTCCTGATGAAAGAAGTGAGTTTCTGAAGGTGTTGAGAAACATGGAGCCAAAAGGGGTGATAGTAAATGAGAACAACATGGAATGTTGCTGCAGTAGTTGTGGGAATTTCGCTACTGGGTTCTCTCGAAGAGTGGAGTACTTGTGGAGGTTTTTGGATTCAACCAGCTCAGCATTCAAGGGTCGTGAGAGTGATGAAAGAAGGGTGATGGAAGGTGAGGCTGCAAAAGCATTGACAAACCAGCGTGAGATGAATGAAGGGAGAGAAAAATGGTGTGGAAGAATGAAAGAAGCAGGGTTTGTAGGGGAAATATTTGGAGAGGATGCCATTGATGGAGCACGAGCTTTGTTAAGGAAGTATGATAGTAATTGGGAGATGAAAGTAGAAGAGAACAGCACCAGTGTGGGACTATGGTGGAAGGGGCAACCTGTTTCTTTCTGTTCTTTGTGGAAGCTGGATGGAAATGGCCCTTGA 1671 0.4482 MTMEPNPTSDHILDWLEGSVSFFPSFLDDPYNNSAYIQEYQLWDQGQDISSQYQTDANTGSPSPNATNSTTTIVAAASTTSTTSLEPYGSINLPLSDLPKKRNATDESSLKPSQSHKHKRIKSRPMNEADNGDAAVEGTVVRKSGGNKKGAAKANGNNCNSGNNKEGRWAEQLLNPCAAAIAGGNLNRVQHLLYVLHELASPTGDANHRLAAYGLRALTNHLSSSSSATSSGSITFASTEPRFFQRSLLKFYEVSPWFSFPNNIANASILQVLAEEPNSSRTLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVPASSSTENGQNMETPFSIGPPGDNFSSRLLGFAQSMNVNLQINRLDNQSLQTLNAEIIDTSPDETFIVCAQFRLHHLNHNTPDERSEFLKVLRNMEPKGVIVNENNMECCCSSCGNFATGFSRRVEYLWRFLDSTSSAFKGRESDERRVMEGEAAKALTNQREMNEGREKWCGRMKEAGFVGEIFGEDAIDGARALLRKYDSNWEMKVEENSTSVGLWWKGQPVSFCSLWKLDGNGP 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00057 556 MobiDBLite consensus disorder prediction 84 163 - -
Sebi236g00057 556 ProSiteProfiles GRAS family profile. 161 550 IPR005202 -
Sebi236g00057 556 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 143 538 IPR005202 -
Sebi236g00057 556 MobiDBLite consensus disorder prediction 100 114 - -
Sebi236g00057 556 Pfam GRAS domain family 171 550 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00057 Sebi-Chr236 812622 814292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00057 2 550 GRAS Transcription Factor Family AT3G13840 50.717 5.55e-178 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi236g00057 GRAS 2e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00057 - - mtr:11434050 874.389