Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi236g00052 ATGCCTACAAAGAAGCTTCAATGGAGATCATTGGTACTAGGCTGTTTCAAGGCCAAGGACCTATCTTTGGAAACCCCGAACATAGTTCCCAAGAAGTCATCTTCAAGTAGAATCTCCATCTCTGATTTAAGTGGATTTGGGAAGGTATATAAAGGGTTCATTGATGACAAGCTTAGGCCTACTCTGACTCCTCGGGTTGTAGCAGTTAAGGCCTTAAATTTGGATGGAAAACAAGGCCACAGAGAGTGGTTGGCTGAAGTAATCATTCTGGGGCAGTTGAAGCATCGTCATCTTGTTAATTTAATTGGCTATTGCTGTGAAGATGAGAACAGGCTTCTTGTGTATGAATACATGGAGAGGGGAAATCTTGAGGATAAGCTTTTCAATGGTGATTACAATGCCAAGCTCTCAGATTTTGGTTTAGCAATAGATGGACCAGAAAAAGATCAAACACATGTTACAACTCGTGTGATGGGTACTCATGGTTATGCTGCTCCAGAGTATATCATGACAGAACCTCTTATGGAATTGAAAGACATCCCAATTGGTCATTTTGTTTATGTGGTACCCAGTGAGGTAGCCAATGAAAGCACACCAAAAGTGAATGAAAAAGGAGCAGAAAATGACCATGATGAGATCAACAAAGATGGGGTGAAAACTAAGGAAGAAGAAAAGGGAGAGAAAAAGGAGAAGGGTCACCACCGGCATCGAAAGAGTCGTAGCAATAGACGTCGGGTTAAGCCATTAAGGTCTCGAGCTGTTTACTCTGACACTGCTCTGTATAAGACTCTTGGAACCAGTTTGTACTCTCCCAACCAAGAACCACCACAATAA 834 0.4209 MPTKKLQWRSLVLGCFKAKDLSLETPNIVPKKSSSSRISISDLSGFGKVYKGFIDDKLRPTLTPRVVAVKALNLDGKQGHREWLAEVIILGQLKHRHLVNLIGYCCEDENRLLVYEYMERGNLEDKLFNGDYNAKLSDFGLAIDGPEKDQTHVTTRVMGTHGYAAPEYIMTEPLMELKDIPIGHFVYVVPSEVANESTPKVNEKGAENDHDEINKDGVKTKEEEKGEKKEKGHHRHRKSRSNRRRVKPLRSRAVYSDTALYKTLGTSLYSPNQEPPQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi236g00052 277 Gene3D Phosphorylase Kinase; domain 1 43 117 - -
Sebi236g00052 277 SUPERFAMILY Protein kinase-like (PK-like) 45 174 IPR011009 -
Sebi236g00052 277 PANTHER OS01G0588500 PROTEIN-RELATED 130 179 - -
Sebi236g00052 277 Pfam Protein tyrosine and serine/threonine kinase 46 127 IPR001245 GO:0004672|GO:0006468
Sebi236g00052 277 MobiDBLite consensus disorder prediction 231 249 - -
Sebi236g00052 277 MobiDBLite consensus disorder prediction 202 230 - -
Sebi236g00052 277 MobiDBLite consensus disorder prediction 194 254 - -
Sebi236g00052 277 Gene3D Transferase(Phosphotransferase) domain 1 118 180 - -
Sebi236g00052 277 ProSiteProfiles Protein kinase domain profile. 35 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi236g00052 Sebi-Chr236 758535 760409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi236g00052 45 180 Glycoside Hydrolase AT3G07070 40.761 3.97e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi236g00052 PK_Tyr_Ser-Thr 2.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi236g00052 - - gmx:100790454 258.84